Tunnel Extractor
WARNING: At this time, the exit tunnel extractor only works on the Haloarcula marismortui structures of the ribosome. This is because each ribosome structure uses its own coordinate system. In my thesis, I calculated the transformation matrices for the different ribosome structures, but as of yet it is not implemented in this program.

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Tunnel Extractor – this program is a special program for extract the exit tunnel from the H.marismortui ribosome structure: PDB 1jj2.

'3V: cavity, channel and cleft volume calculator and extractor' (free text)
Nucleic Acids Res. 2010 July 1; 38(Web Server issue): W555–W562
by Neil R. Voss and Mark Gerstein
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If you find this useful or want more functionality please contact Neil <vossman77 [at] gmail [dot] com>
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