3v Results for JobId '2017.jun13.94e'

Run Information

biological unit: no
use hetero atoms: no
allow public display: no
grid resolution: high
smallprobe: 2.0
bigprobe: 8.0
pymol: False
waterpdb: False
pdbfile: /var/www/html/3vee/output/uploads/2017.jun13.94e.pdb
numchan: 12



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Images of channel 1:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 416 Å3
Surface area: 384 Å2
Sphericity, Ψ: 0.70
Effective radius: 3.25 Å
Center of Mass: (-48.6, -59.7, -52.4) Å

Downloadable files of your surface:




Images of channel 2:

           
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Volume Information

Voxel size: 0.5 Å
Volume: 205 Å3
Surface area: 199 Å2
Sphericity, Ψ: 0.85
Effective radius: 3.10 Å
Center of Mass: (-50.5, -62.1, -54.5) Å

Downloadable files of your surface:




Images of channel 3:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 974 Å3
Surface area: 640 Å2
Sphericity, Ψ: 0.74
Effective radius: 4.56 Å
Center of Mass: (-45.2, -58.9, -50.0) Å

Downloadable files of your surface:




Images of channel 4:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 225 Å3
Surface area: 211 Å2
Sphericity, Ψ: 0.85
Effective radius: 3.20 Å
Center of Mass: (-49.8, -62.0, -53.7) Å

Downloadable files of your surface:




Images of channel 5:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 558 Å3
Surface area: 555 Å2
Sphericity, Ψ: 0.59
Effective radius: 3.02 Å
Center of Mass: (-43.0, -60.8, -51.2) Å

Downloadable files of your surface:




Images of channel 6:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 432 Å3
Surface area: 406 Å2
Sphericity, Ψ: 0.68
Effective radius: 3.19 Å
Center of Mass: (-46.5, -59.5, -53.0) Å

Downloadable files of your surface:




Images of channel 7:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 1187 Å3
Surface area: 813 Å2
Sphericity, Ψ: 0.67
Effective radius: 4.38 Å
Center of Mass: (-41.3, -58.5, -48.1) Å

Downloadable files of your surface:




Images of channel 8:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 695 Å3
Surface area: 656 Å2
Sphericity, Ψ: 0.58
Effective radius: 3.18 Å
Center of Mass: (-48.9, -57.6, -51.3) Å

Downloadable files of your surface:




Images of channel 9:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 160 Å3
Surface area: 171 Å2
Sphericity, Ψ: 0.83
Effective radius: 2.80 Å
Center of Mass: (-51.0, -62.0, -52.3) Å

Downloadable files of your surface:




Images of channel 10:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 227 Å3
Surface area: 237 Å2
Sphericity, Ψ: 0.76
Effective radius: 2.86 Å
Center of Mass: (-50.9, -60.5, -53.8) Å

Downloadable files of your surface:




Images of channel 11:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 203 Å3
Surface area: 196 Å2
Sphericity, Ψ: 0.85
Effective radius: 3.11 Å
Center of Mass: (-49.3, -61.1, -54.7) Å

Downloadable files of your surface:




Images of channel 12:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 450 Å3
Surface area: 389 Å2
Sphericity, Ψ: 0.73
Effective radius: 3.47 Å
Center of Mass: (-50.4, -61.8, -50.3) Å

Downloadable files of your surface:



Downloadable files of your surface:

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Citation:
'3V: cavity, channel and cleft volume calculator and extractor' (free text)
Nucleic Acids Res. 2010 July 1; 38(Web Server issue): W555–W562
by Neil R. Voss and Mark Gerstein
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If you find this useful or want more functionality please contact Neil <vossman77 [at] yahoo.com>
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