3v Results for JobId '2017.may08.5dd'

Run Information

PDB id: 2pvr 
biological unit: no
use hetero atoms: no
allow public display: no
grid resolution: high
probestep: 1.0
minprobe: 0.0
pymol: True
waterpdb: False
maxprobe: 9.0



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Images of your surface at probe size: 0.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 36049 Å3
Surface area: 33158 Å2
Sphericity, Ψ: 0.16
Effective radius: 3.26 Å
Center of Mass: (-1.5, -0.6, 5.9) Å

Downloadable files of your surface:




Images of your surface at probe size: 1.000:

           
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Volume Information

Voxel size: 0.5 Å
Volume: 48815 Å3
Surface area: 16176 Å2
Sphericity, Ψ: 0.40
Effective radius: 9.05 Å
Center of Mass: (-3.4, -0.5, 6.9) Å

Downloadable files of your surface:




Images of your surface at probe size: 2.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 52297 Å3
Surface area: 12307 Å2
Sphericity, Ψ: 0.55
Effective radius: 12.75 Å
Center of Mass: (-1.5, -0.6, 5.8) Å

Downloadable files of your surface:




Images of your surface at probe size: 3.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 54696 Å3
Surface area: 11018 Å2
Sphericity, Ψ: 0.63
Effective radius: 14.89 Å
Center of Mass: (-3.6, -0.6, 6.7) Å

Downloadable files of your surface:




Images of your surface at probe size: 4.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 57536 Å3
Surface area: 10411 Å2
Sphericity, Ψ: 0.69
Effective radius: 16.58 Å
Center of Mass: (-1.7, -0.5, 5.6) Å

Downloadable files of your surface:




Images of your surface at probe size: 5.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 59100 Å3
Surface area: 10136 Å2
Sphericity, Ψ: 0.72
Effective radius: 17.49 Å
Center of Mass: (-3.7, -0.5, 6.5) Å

Downloadable files of your surface:




Images of your surface at probe size: 6.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 60902 Å3
Surface area: 9928 Å2
Sphericity, Ψ: 0.75
Effective radius: 18.40 Å
Center of Mass: (-1.8, -0.5, 5.5) Å

Downloadable files of your surface:




Images of your surface at probe size: 7.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 61819 Å3
Surface area: 9803 Å2
Sphericity, Ψ: 0.77
Effective radius: 18.92 Å
Center of Mass: (-3.8, -0.5, 6.5) Å

Downloadable files of your surface:




Images of your surface at probe size: 8.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 62939 Å3
Surface area: 9737 Å2
Sphericity, Ψ: 0.79
Effective radius: 19.39 Å
Center of Mass: (-1.8, -0.5, 5.5) Å

Downloadable files of your surface:




Images of your surface at probe size: 9.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 63873 Å3
Surface area: 9732 Å2
Sphericity, Ψ: 0.79
Effective radius: 19.69 Å
Center of Mass: (-3.8, -0.5, 6.4) Å

Downloadable files of your surface:



Downloadable files of your surface:

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Citation:
'3V: cavity, channel and cleft volume calculator and extractor' (free text)
Nucleic Acids Res. 2010 July 1; 38(Web Server issue): W555–W562
by Neil R. Voss and Mark Gerstein
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