3v Results for JobId '2017.oct12.aa7'

Run Information

biological unit: no
use hetero atoms: no
allow public display: no
grid resolution: high
smallprobe: 3.0
bigprobe: 10.0
pymol: False
waterpdb: False
pdbfile: /var/www/html/3vee/output/uploads/2017.oct12.aa7.pdb
numchan: 3



Show running log


Images of channel 1:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 3589 Å3
Surface area: 1985 Å2
Sphericity, Ψ: 0.57
Effective radius: 5.42 Å
Center of Mass: (-41.9, -35.0, -44.2) Å

Downloadable files of your surface:




Images of channel 2:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 1064 Å3
Surface area: 683 Å2
Sphericity, Ψ: 0.74
Effective radius: 4.67 Å
Center of Mass: (-50.1, -42.3, -55.4) Å

Downloadable files of your surface:




Images of channel 3:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 1596 Å3
Surface area: 1046 Å2
Sphericity, Ψ: 0.63
Effective radius: 4.58 Å
Center of Mass: (-46.7, -43.4, -49.6) Å

Downloadable files of your surface:



Downloadable files of your surface:

Show running log



Citation:
'3V: cavity, channel and cleft volume calculator and extractor' (free text)
Nucleic Acids Res. 2010 July 1; 38(Web Server issue): W555–W562
by Neil R. Voss and Mark Gerstein
Download source code
Help
Site news and updates
If you find this useful or want more functionality please contact Neil <vossman77 [at] yahoo.com>
back to main page