3v Results for JobId '2018.apr02.28e'

Run Information

biological unit: no
use hetero atoms: no
allow public display: no
grid resolution: low
probestep: 1.0
minprobe: 0.0
pymol: False
waterpdb: False
pdbfile: /var/www/html/3vee/output/uploads/2018.apr02.28e.pdb
maxprobe: 4.0



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Images of your surface at probe size: 0.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 1.0 Å
Volume: 63216 Å3
Surface area: 52276 Å2
Sphericity, Ψ: 0.15
Effective radius: 3.63 Å
Center of Mass: (6.1, -2.4, -0.7) Å

Downloadable files of your surface:




Images of your surface at probe size: 1.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 1.0 Å
Volume: 104894 Å3
Surface area: 25825 Å2
Sphericity, Ψ: 0.42
Effective radius: 12.19 Å
Center of Mass: (10.1, -2.5, -2.8) Å

Downloadable files of your surface:




Images of your surface at probe size: 2.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 1.0 Å
Volume: 97529 Å3
Surface area: 20803 Å2
Sphericity, Ψ: 0.49
Effective radius: 14.06 Å
Center of Mass: (8.1, -2.5, -4.7) Å

Downloadable files of your surface:




Images of your surface at probe size: 3.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 1.0 Å
Volume: 100962 Å3
Surface area: 18826 Å2
Sphericity, Ψ: 0.56
Effective radius: 16.09 Å
Center of Mass: (6.1, -2.5, -0.7) Å

Downloadable files of your surface:




Images of your surface at probe size: 4.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 1.0 Å
Volume: 103977 Å3
Surface area: 17725 Å2
Sphericity, Ψ: 0.60
Effective radius: 17.60 Å
Center of Mass: (6.1, -2.5, -0.8) Å

Downloadable files of your surface:



Downloadable files of your surface:

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Citation:
'3V: cavity, channel and cleft volume calculator and extractor' (free text)
Nucleic Acids Res. 2010 July 1; 38(Web Server issue): W555–W562
by Neil R. Voss and Mark Gerstein
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