3v Results for JobId '2018.apr16.6fe'

Run Information

biological unit: no
use hetero atoms: no
allow public display: no
grid resolution: medium
smallprobe: 2.0
bigprobe: 6.0
pymol: False
waterpdb: False
pdbfile: /var/www/html/3vee/output/uploads/2018.apr16.6fe.pdb
numchan: 10



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Images of channel 1:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.8 Å
Volume: 193 Å3
Surface area: 215 Å2
Sphericity, Ψ: 0.75
Effective radius: 2.69 Å
Center of Mass: (-55.4, -44.1, -45.7) Å

Downloadable files of your surface:




Images of channel 2:

           
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Volume Information

Voxel size: 0.8 Å
Volume: 185 Å3
Surface area: 177 Å2
Sphericity, Ψ: 0.89
Effective radius: 3.14 Å
Center of Mass: (-56.6, -44.4, -47.5) Å

Downloadable files of your surface:




Images of channel 3:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.8 Å
Volume: 472 Å3
Surface area: 356 Å2
Sphericity, Ψ: 0.82
Effective radius: 3.98 Å
Center of Mass: (-55.8, -44.3, -42.6) Å

Downloadable files of your surface:




Images of channel 4:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.8 Å
Volume: 623 Å3
Surface area: 445 Å2
Sphericity, Ψ: 0.79
Effective radius: 4.20 Å
Center of Mass: (-55.5, -43.7, -44.0) Å

Downloadable files of your surface:




Images of channel 5:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.8 Å
Volume: 2502 Å3
Surface area: 1691 Å2
Sphericity, Ψ: 0.53
Effective radius: 4.44 Å
Center of Mass: (-51.4, -28.7, -38.1) Å

Downloadable files of your surface:




Images of channel 6:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.8 Å
Volume: 377 Å3
Surface area: 268 Å2
Sphericity, Ψ: 0.94
Effective radius: 4.22 Å
Center of Mass: (-56.6, -43.8, -46.2) Å

Downloadable files of your surface:




Images of channel 7:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.8 Å
Volume: 288 Å3
Surface area: 260 Å2
Sphericity, Ψ: 0.81
Effective radius: 3.31 Å
Center of Mass: (-54.0, -46.5, -45.4) Å

Downloadable files of your surface:




Images of channel 8:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.8 Å
Volume: 1485 Å3
Surface area: 915 Å2
Sphericity, Ψ: 0.69
Effective radius: 4.87 Å
Center of Mass: (-49.6, -39.4, -44.2) Å

Downloadable files of your surface:




Images of channel 9:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.8 Å
Volume: 628 Å3
Surface area: 537 Å2
Sphericity, Ψ: 0.66
Effective radius: 3.50 Å
Center of Mass: (-52.9, -43.1, -43.5) Å

Downloadable files of your surface:




Images of channel 10:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.8 Å
Volume: 741 Å3
Surface area: 593 Å2
Sphericity, Ψ: 0.67
Effective radius: 3.75 Å
Center of Mass: (-54.8, -41.1, -42.5) Å

Downloadable files of your surface:



Downloadable files of your surface:

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Citation:
'3V: cavity, channel and cleft volume calculator and extractor' (free text)
Nucleic Acids Res. 2010 July 1; 38(Web Server issue): W555–W562
by Neil R. Voss and Mark Gerstein
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If you find this useful or want more functionality please contact Neil <vossman77 [at] gmail [dot] com>
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