3v Results for JobId '2019.apr08.8bf'

Run Information

biological unit: no
use hetero atoms: no
allow public display: no
grid resolution: low
smallprobe: 1.5
bigprobe: 9.0
pymol: False
waterpdb: False
pdbfile: /var/www/html/3vee/output/uploads/2019.apr08.8bf.pdb
numchan: 3



Show running log


Images of channel 1:

           
View Volume in Jmol  

Volume Information

Voxel size: 1.0 Å
Volume: 2247 Å3
Surface area: 1681 Å2
Sphericity, Ψ: 0.49
Effective radius: 4.01 Å
Center of Mass: (-34.7, -39.8, -42.2) Å

Downloadable files of your surface:




Images of channel 2:

           
View Volume in Jmol  

Volume Information

Voxel size: 1.0 Å
Volume: 1851 Å3
Surface area: 1445 Å2
Sphericity, Ψ: 0.50
Effective radius: 3.84 Å
Center of Mass: (-35.1, -38.4, -40.2) Å

Downloadable files of your surface:




Images of channel 3:

           
View Volume in Jmol  

Volume Information

Voxel size: 1.0 Å
Volume: 3511 Å3
Surface area: 2804 Å2
Sphericity, Ψ: 0.40
Effective radius: 3.76 Å
Center of Mass: (-32.4, -33.3, -33.4) Å

Downloadable files of your surface:



Downloadable files of your surface:

Show running log



Citation:
'3V: cavity, channel and cleft volume calculator and extractor' (free text)
Nucleic Acids Res. 2010 July 1; 38(Web Server issue): W555–W562
by Neil R. Voss and Mark Gerstein
Download source code
Help
Site news and updates
If you find this useful or want more functionality please contact Neil <vossman77 [at] gmail [dot] com>
back to main page