3v Running Log for JobId '2019.aug01.f79'

Program is still running, progress is shown below

Show unfinished results

  • host ip address=150.241.253.98 (Thu Aug 1 13:39:07 2019)
  • converting pdb into xyzr (Thu Aug 1 13:39:07 2019)
  • completed conversion of PDB file: 2019.aug01.f79.pdb (size: 15k) (Thu Aug 1 13:39:07 2019)
  • converted 484 atoms of 484 atoms (Thu Aug 1 13:39:07 2019)
  • found 484 atoms in pdb (Thu Aug 1 13:39:07 2019)
  • starting probe size 0.000 (Thu Aug 1 13:39:07 2019)
  • running 3v volume program (Thu Aug 1 13:39:07 2019)
  • smoothing out volume (Thu Aug 1 13:39:07 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:39:07 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:39:12 2019)
  • compressing 2019.aug01.f79-0.0.obj (Thu Aug 1 13:39:12 2019)
  • UCSF Chimera completed in 4.68 sec (Thu Aug 1 13:39:12 2019)
  • analyzing volume (Thu Aug 1 13:39:12 2019)
  • normal CoM (-3.2, -0.3, 3.0) Å (Thu Aug 1 13:39:12 2019)
  • reduced center failed (Thu Aug 1 13:39:13 2019)
  • volume analysis completed in 457.09 msec (Thu Aug 1 13:39:13 2019)
  • compressing 2019.aug01.f79-0.0.mrc (Thu Aug 1 13:39:13 2019)
  • starting probe size 0.100 (Thu Aug 1 13:39:13 2019)
  • running 3v volume program (Thu Aug 1 13:39:13 2019)
  • smoothing out volume (Thu Aug 1 13:39:13 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:39:13 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:39:17 2019)
  • compressing 2019.aug01.f79-0.1.obj (Thu Aug 1 13:39:17 2019)
  • UCSF Chimera completed in 4.7 sec (Thu Aug 1 13:39:17 2019)
  • analyzing volume (Thu Aug 1 13:39:17 2019)
  • normal CoM (-3.2, -0.3, 2.9) Å (Thu Aug 1 13:39:18 2019)
  • reduced center failed (Thu Aug 1 13:39:18 2019)
  • volume analysis completed in 451.64 msec (Thu Aug 1 13:39:18 2019)
  • compressing 2019.aug01.f79-0.1.mrc (Thu Aug 1 13:39:18 2019)
  • starting probe size 0.200 (Thu Aug 1 13:39:18 2019)
  • running 3v volume program (Thu Aug 1 13:39:18 2019)
  • smoothing out volume (Thu Aug 1 13:39:18 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:39:18 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:39:23 2019)
  • compressing 2019.aug01.f79-0.2.obj (Thu Aug 1 13:39:23 2019)
  • UCSF Chimera completed in 4.91 sec (Thu Aug 1 13:39:23 2019)
  • analyzing volume (Thu Aug 1 13:39:23 2019)
  • normal CoM (-3.1, -0.3, 2.9) Å (Thu Aug 1 13:39:23 2019)
  • reduced center failed (Thu Aug 1 13:39:23 2019)
  • volume analysis completed in 471.8 msec (Thu Aug 1 13:39:23 2019)
  • compressing 2019.aug01.f79-0.2.mrc (Thu Aug 1 13:39:23 2019)
  • starting probe size 0.300 (Thu Aug 1 13:39:23 2019)
  • running 3v volume program (Thu Aug 1 13:39:23 2019)
  • smoothing out volume (Thu Aug 1 13:39:23 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:39:24 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:39:28 2019)
  • compressing 2019.aug01.f79-0.3.obj (Thu Aug 1 13:39:28 2019)
  • UCSF Chimera completed in 4.88 sec (Thu Aug 1 13:39:28 2019)
  • analyzing volume (Thu Aug 1 13:39:28 2019)
  • normal CoM (-3.2, -0.3, 2.9) Å (Thu Aug 1 13:39:29 2019)
  • reduced center failed (Thu Aug 1 13:39:29 2019)
  • volume analysis completed in 458.34 msec (Thu Aug 1 13:39:29 2019)
  • compressing 2019.aug01.f79-0.3.mrc (Thu Aug 1 13:39:29 2019)
  • starting probe size 0.400 (Thu Aug 1 13:39:29 2019)
  • running 3v volume program (Thu Aug 1 13:39:29 2019)
  • smoothing out volume (Thu Aug 1 13:39:29 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:39:29 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:39:34 2019)
  • compressing 2019.aug01.f79-0.4.obj (Thu Aug 1 13:39:34 2019)
  • UCSF Chimera completed in 4.95 sec (Thu Aug 1 13:39:34 2019)
  • analyzing volume (Thu Aug 1 13:39:34 2019)
  • normal CoM (-3.1, -2.3, 2.8) Å (Thu Aug 1 13:39:34 2019)
  • reduced center failed (Thu Aug 1 13:39:34 2019)
  • volume analysis completed in 0.52 sec (Thu Aug 1 13:39:34 2019)
  • compressing 2019.aug01.f79-0.4.mrc (Thu Aug 1 13:39:34 2019)
  • starting probe size 0.500 (Thu Aug 1 13:39:34 2019)
  • running 3v volume program (Thu Aug 1 13:39:34 2019)
  • smoothing out volume (Thu Aug 1 13:39:35 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:39:35 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:39:39 2019)
  • compressing 2019.aug01.f79-0.5.obj (Thu Aug 1 13:39:39 2019)
  • UCSF Chimera completed in 4.93 sec (Thu Aug 1 13:39:39 2019)
  • analyzing volume (Thu Aug 1 13:39:39 2019)
  • normal CoM (-3.0, -2.3, 2.7) Å (Thu Aug 1 13:39:40 2019)
  • reduced center failed (Thu Aug 1 13:39:40 2019)
  • volume analysis completed in 0.52 sec (Thu Aug 1 13:39:40 2019)
  • compressing 2019.aug01.f79-0.5.mrc (Thu Aug 1 13:39:40 2019)
  • starting probe size 0.600 (Thu Aug 1 13:39:40 2019)
  • running 3v volume program (Thu Aug 1 13:39:40 2019)
  • smoothing out volume (Thu Aug 1 13:39:40 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:39:40 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:39:45 2019)
  • compressing 2019.aug01.f79-0.6.obj (Thu Aug 1 13:39:45 2019)
  • UCSF Chimera completed in 4.97 sec (Thu Aug 1 13:39:45 2019)
  • analyzing volume (Thu Aug 1 13:39:45 2019)
  • normal CoM (-3.0, -2.3, 2.7) Å (Thu Aug 1 13:39:46 2019)
  • reduced center failed (Thu Aug 1 13:39:46 2019)
  • volume analysis completed in 0.52 sec (Thu Aug 1 13:39:46 2019)
  • compressing 2019.aug01.f79-0.6.mrc (Thu Aug 1 13:39:46 2019)
  • starting probe size 0.700 (Thu Aug 1 13:39:46 2019)
  • running 3v volume program (Thu Aug 1 13:39:46 2019)
  • smoothing out volume (Thu Aug 1 13:39:46 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:39:46 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:39:51 2019)
  • compressing 2019.aug01.f79-0.7.obj (Thu Aug 1 13:39:51 2019)
  • UCSF Chimera completed in 5.05 sec (Thu Aug 1 13:39:51 2019)
  • analyzing volume (Thu Aug 1 13:39:51 2019)
  • normal CoM (-2.9, -2.3, 2.6) Å (Thu Aug 1 13:39:51 2019)
  • reduced center failed (Thu Aug 1 13:39:51 2019)
  • volume analysis completed in 0.52 sec (Thu Aug 1 13:39:51 2019)
  • compressing 2019.aug01.f79-0.7.mrc (Thu Aug 1 13:39:51 2019)
  • starting probe size 0.800 (Thu Aug 1 13:39:51 2019)
  • running 3v volume program (Thu Aug 1 13:39:51 2019)
  • smoothing out volume (Thu Aug 1 13:39:51 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:39:52 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:39:57 2019)
  • compressing 2019.aug01.f79-0.8.obj (Thu Aug 1 13:39:57 2019)
  • UCSF Chimera completed in 5.14 sec (Thu Aug 1 13:39:57 2019)
  • analyzing volume (Thu Aug 1 13:39:57 2019)
  • normal CoM (-2.9, -2.2, 2.5) Å (Thu Aug 1 13:39:57 2019)
  • reduced center failed (Thu Aug 1 13:39:57 2019)
  • volume analysis completed in 0.54 sec (Thu Aug 1 13:39:57 2019)
  • compressing 2019.aug01.f79-0.8.mrc (Thu Aug 1 13:39:57 2019)
  • starting probe size 0.900 (Thu Aug 1 13:39:57 2019)
  • running 3v volume program (Thu Aug 1 13:39:57 2019)
  • smoothing out volume (Thu Aug 1 13:39:57 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:39:57 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:40:02 2019)
  • compressing 2019.aug01.f79-0.9.obj (Thu Aug 1 13:40:02 2019)
  • UCSF Chimera completed in 5.12 sec (Thu Aug 1 13:40:02 2019)
  • analyzing volume (Thu Aug 1 13:40:02 2019)
  • normal CoM (-2.8, -2.2, 2.4) Å (Thu Aug 1 13:40:03 2019)
  • reduced center failed (Thu Aug 1 13:40:03 2019)
  • volume analysis completed in 0.53 sec (Thu Aug 1 13:40:03 2019)
  • compressing 2019.aug01.f79-0.9.mrc (Thu Aug 1 13:40:03 2019)
  • starting probe size 1.000 (Thu Aug 1 13:40:03 2019)
  • running 3v volume program (Thu Aug 1 13:40:03 2019)
  • smoothing out volume (Thu Aug 1 13:40:03 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:40:03 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:40:08 2019)
  • compressing 2019.aug01.f79-1.0.obj (Thu Aug 1 13:40:08 2019)
  • UCSF Chimera completed in 4.87 sec (Thu Aug 1 13:40:08 2019)
  • analyzing volume (Thu Aug 1 13:40:08 2019)
  • normal CoM (-4.8, -2.2, 2.4) Å (Thu Aug 1 13:40:08 2019)
  • reduced center failed (Thu Aug 1 13:40:09 2019)
  • volume analysis completed in 0.57 sec (Thu Aug 1 13:40:09 2019)
  • compressing 2019.aug01.f79-1.0.mrc (Thu Aug 1 13:40:09 2019)
  • starting probe size 1.100 (Thu Aug 1 13:40:09 2019)
  • running 3v volume program (Thu Aug 1 13:40:09 2019)
  • smoothing out volume (Thu Aug 1 13:40:09 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:40:09 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:40:13 2019)
  • compressing 2019.aug01.f79-1.1.obj (Thu Aug 1 13:40:13 2019)
  • UCSF Chimera completed in 4.62 sec (Thu Aug 1 13:40:13 2019)
  • analyzing volume (Thu Aug 1 13:40:13 2019)
  • normal CoM (-5.3, -2.4, 3.0) Å (Thu Aug 1 13:40:14 2019)
  • reduced center failed (Thu Aug 1 13:40:14 2019)
  • volume analysis completed in 0.54 sec (Thu Aug 1 13:40:14 2019)
  • compressing 2019.aug01.f79-1.1.mrc (Thu Aug 1 13:40:14 2019)
  • starting probe size 1.200 (Thu Aug 1 13:40:14 2019)
  • running 3v volume program (Thu Aug 1 13:40:14 2019)
  • smoothing out volume (Thu Aug 1 13:40:14 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:40:14 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:40:19 2019)
  • compressing 2019.aug01.f79-1.2.obj (Thu Aug 1 13:40:19 2019)
  • UCSF Chimera completed in 4.74 sec (Thu Aug 1 13:40:19 2019)
  • analyzing volume (Thu Aug 1 13:40:19 2019)
  • normal CoM (-5.2, -2.3, 3.0) Å (Thu Aug 1 13:40:19 2019)
  • reduced center failed (Thu Aug 1 13:40:19 2019)
  • volume analysis completed in 0.55 sec (Thu Aug 1 13:40:19 2019)
  • compressing 2019.aug01.f79-1.2.mrc (Thu Aug 1 13:40:19 2019)
  • starting probe size 1.300 (Thu Aug 1 13:40:19 2019)
  • running 3v volume program (Thu Aug 1 13:40:19 2019)
  • smoothing out volume (Thu Aug 1 13:40:19 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:40:19 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:40:24 2019)
  • compressing 2019.aug01.f79-1.3.obj (Thu Aug 1 13:40:24 2019)
  • UCSF Chimera completed in 4.81 sec (Thu Aug 1 13:40:24 2019)
  • analyzing volume (Thu Aug 1 13:40:24 2019)
  • normal CoM (-5.2, -2.3, 2.8) Å (Thu Aug 1 13:40:25 2019)
  • reduced center failed (Thu Aug 1 13:40:25 2019)
  • volume analysis completed in 0.56 sec (Thu Aug 1 13:40:25 2019)
  • compressing 2019.aug01.f79-1.3.mrc (Thu Aug 1 13:40:25 2019)
  • starting probe size 1.400 (Thu Aug 1 13:40:25 2019)
  • running 3v volume program (Thu Aug 1 13:40:25 2019)
  • smoothing out volume (Thu Aug 1 13:40:25 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:40:25 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:40:30 2019)
  • compressing 2019.aug01.f79-1.4.obj (Thu Aug 1 13:40:30 2019)
  • UCSF Chimera completed in 4.74 sec (Thu Aug 1 13:40:30 2019)
  • analyzing volume (Thu Aug 1 13:40:30 2019)
  • normal CoM (-5.1, -2.3, 2.7) Å (Thu Aug 1 13:40:30 2019)
  • reduced center failed (Thu Aug 1 13:40:30 2019)
  • volume analysis completed in 0.55 sec (Thu Aug 1 13:40:30 2019)
  • compressing 2019.aug01.f79-1.4.mrc (Thu Aug 1 13:40:30 2019)
  • starting probe size 1.500 (Thu Aug 1 13:40:30 2019)
  • running 3v volume program (Thu Aug 1 13:40:30 2019)
  • smoothing out volume (Thu Aug 1 13:40:30 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:40:30 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:40:35 2019)
  • compressing 2019.aug01.f79-1.5.obj (Thu Aug 1 13:40:35 2019)
  • UCSF Chimera completed in 4.73 sec (Thu Aug 1 13:40:35 2019)
  • analyzing volume (Thu Aug 1 13:40:35 2019)
  • normal CoM (-5.3, -2.4, 3.1) Å (Thu Aug 1 13:40:36 2019)
  • reduced center failed (Thu Aug 1 13:40:36 2019)
  • volume analysis completed in 0.55 sec (Thu Aug 1 13:40:36 2019)
  • compressing 2019.aug01.f79-1.5.mrc (Thu Aug 1 13:40:36 2019)
  • starting probe size 1.600 (Thu Aug 1 13:40:36 2019)
  • running 3v volume program (Thu Aug 1 13:40:36 2019)
  • smoothing out volume (Thu Aug 1 13:40:36 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:40:36 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:40:40 2019)
  • compressing 2019.aug01.f79-1.6.obj (Thu Aug 1 13:40:40 2019)
  • UCSF Chimera completed in 4.69 sec (Thu Aug 1 13:40:40 2019)
  • analyzing volume (Thu Aug 1 13:40:40 2019)
  • normal CoM (-5.2, -2.3, 3.0) Å (Thu Aug 1 13:40:41 2019)
  • reduced center failed (Thu Aug 1 13:40:41 2019)
  • volume analysis completed in 0.54 sec (Thu Aug 1 13:40:41 2019)
  • compressing 2019.aug01.f79-1.6.mrc (Thu Aug 1 13:40:41 2019)
  • starting probe size 1.700 (Thu Aug 1 13:40:41 2019)
  • running 3v volume program (Thu Aug 1 13:40:41 2019)
  • smoothing out volume (Thu Aug 1 13:40:41 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:40:41 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:40:46 2019)
  • compressing 2019.aug01.f79-1.7.obj (Thu Aug 1 13:40:46 2019)
  • UCSF Chimera completed in 4.88 sec (Thu Aug 1 13:40:46 2019)
  • analyzing volume (Thu Aug 1 13:40:46 2019)
  • normal CoM (-5.1, -2.3, 2.8) Å (Thu Aug 1 13:40:47 2019)
  • reduced center failed (Thu Aug 1 13:40:47 2019)
  • volume analysis completed in 0.55 sec (Thu Aug 1 13:40:47 2019)
  • compressing 2019.aug01.f79-1.7.mrc (Thu Aug 1 13:40:47 2019)
  • starting probe size 1.800 (Thu Aug 1 13:40:47 2019)
  • running 3v volume program (Thu Aug 1 13:40:47 2019)
  • smoothing out volume (Thu Aug 1 13:40:47 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:40:47 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:40:52 2019)
  • compressing 2019.aug01.f79-1.8.obj (Thu Aug 1 13:40:52 2019)
  • UCSF Chimera completed in 5.06 sec (Thu Aug 1 13:40:52 2019)
  • analyzing volume (Thu Aug 1 13:40:52 2019)
  • normal CoM (-5.3, -2.3, 3.0) Å (Thu Aug 1 13:40:52 2019)
  • reduced center failed (Thu Aug 1 13:40:52 2019)
  • volume analysis completed in 0.56 sec (Thu Aug 1 13:40:52 2019)
  • compressing 2019.aug01.f79-1.8.mrc (Thu Aug 1 13:40:52 2019)
  • starting probe size 1.900 (Thu Aug 1 13:40:52 2019)
  • running 3v volume program (Thu Aug 1 13:40:52 2019)
  • smoothing out volume (Thu Aug 1 13:40:55 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:40:56 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:41:00 2019)
  • compressing 2019.aug01.f79-1.9.obj (Thu Aug 1 13:41:00 2019)
  • UCSF Chimera completed in 4.83 sec (Thu Aug 1 13:41:00 2019)
  • analyzing volume (Thu Aug 1 13:41:00 2019)
  • normal CoM (-5.2, -2.3, 2.9) Å (Thu Aug 1 13:41:01 2019)
  • reduced center failed (Thu Aug 1 13:41:01 2019)
  • volume analysis completed in 0.56 sec (Thu Aug 1 13:41:01 2019)
  • compressing 2019.aug01.f79-1.9.mrc (Thu Aug 1 13:41:01 2019)
  • starting probe size 2.000 (Thu Aug 1 13:41:01 2019)
  • running 3v volume program (Thu Aug 1 13:41:01 2019)
  • smoothing out volume (Thu Aug 1 13:41:01 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:41:01 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:41:06 2019)
  • compressing 2019.aug01.f79-2.0.obj (Thu Aug 1 13:41:06 2019)
  • UCSF Chimera completed in 4.79 sec (Thu Aug 1 13:41:06 2019)
  • analyzing volume (Thu Aug 1 13:41:06 2019)
  • normal CoM (-5.2, -2.3, 2.8) Å (Thu Aug 1 13:41:06 2019)
  • reduced center failed (Thu Aug 1 13:41:06 2019)
  • volume analysis completed in 0.56 sec (Thu Aug 1 13:41:06 2019)
  • compressing 2019.aug01.f79-2.0.mrc (Thu Aug 1 13:41:06 2019)
  • starting probe size 2.100 (Thu Aug 1 13:41:06 2019)
  • running 3v volume program (Thu Aug 1 13:41:06 2019)
  • smoothing out volume (Thu Aug 1 13:41:07 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:41:07 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:41:11 2019)
  • compressing 2019.aug01.f79-2.1.obj (Thu Aug 1 13:41:11 2019)
  • UCSF Chimera completed in 4.79 sec (Thu Aug 1 13:41:11 2019)
  • analyzing volume (Thu Aug 1 13:41:11 2019)
  • normal CoM (-5.4, -2.3, 3.0) Å (Thu Aug 1 13:41:12 2019)
  • reduced center failed (Thu Aug 1 13:41:12 2019)
  • volume analysis completed in 0.56 sec (Thu Aug 1 13:41:12 2019)
  • compressing 2019.aug01.f79-2.1.mrc (Thu Aug 1 13:41:12 2019)
  • starting probe size 2.200 (Thu Aug 1 13:41:12 2019)
  • running 3v volume program (Thu Aug 1 13:41:12 2019)
  • smoothing out volume (Thu Aug 1 13:41:12 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:41:12 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:41:17 2019)
  • compressing 2019.aug01.f79-2.2.obj (Thu Aug 1 13:41:17 2019)
  • UCSF Chimera completed in 4.81 sec (Thu Aug 1 13:41:17 2019)
  • analyzing volume (Thu Aug 1 13:41:17 2019)
  • normal CoM (-5.3, -2.3, 2.9) Å (Thu Aug 1 13:41:17 2019)
  • reduced center failed (Thu Aug 1 13:41:17 2019)
  • volume analysis completed in 0.57 sec (Thu Aug 1 13:41:17 2019)
  • compressing 2019.aug01.f79-2.2.mrc (Thu Aug 1 13:41:17 2019)
  • starting probe size 2.300 (Thu Aug 1 13:41:17 2019)
  • running 3v volume program (Thu Aug 1 13:41:17 2019)
  • smoothing out volume (Thu Aug 1 13:41:18 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:41:18 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:41:22 2019)
  • compressing 2019.aug01.f79-2.3.obj (Thu Aug 1 13:41:22 2019)
  • UCSF Chimera completed in 4.68 sec (Thu Aug 1 13:41:22 2019)
  • analyzing volume (Thu Aug 1 13:41:22 2019)
  • normal CoM (-5.5, -2.4, 3.1) Å (Thu Aug 1 13:41:23 2019)
  • reduced center failed (Thu Aug 1 13:41:23 2019)
  • volume analysis completed in 0.55 sec (Thu Aug 1 13:41:23 2019)
  • compressing 2019.aug01.f79-2.3.mrc (Thu Aug 1 13:41:23 2019)
  • starting probe size 2.400 (Thu Aug 1 13:41:23 2019)
  • running 3v volume program (Thu Aug 1 13:41:23 2019)
  • smoothing out volume (Thu Aug 1 13:41:23 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:41:23 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:41:28 2019)
  • compressing 2019.aug01.f79-2.4.obj (Thu Aug 1 13:41:28 2019)
  • UCSF Chimera completed in 4.77 sec (Thu Aug 1 13:41:28 2019)
  • analyzing volume (Thu Aug 1 13:41:28 2019)
  • normal CoM (-5.5, -2.3, 3.0) Å (Thu Aug 1 13:41:28 2019)
  • reduced center failed (Thu Aug 1 13:41:28 2019)
  • volume analysis completed in 0.56 sec (Thu Aug 1 13:41:28 2019)
  • compressing 2019.aug01.f79-2.4.mrc (Thu Aug 1 13:41:28 2019)
  • starting probe size 2.500 (Thu Aug 1 13:41:28 2019)
  • running 3v volume program (Thu Aug 1 13:41:28 2019)
  • smoothing out volume (Thu Aug 1 13:41:28 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:41:28 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:41:33 2019)
  • compressing 2019.aug01.f79-2.5.obj (Thu Aug 1 13:41:33 2019)
  • UCSF Chimera completed in 4.71 sec (Thu Aug 1 13:41:33 2019)
  • analyzing volume (Thu Aug 1 13:41:33 2019)
  • normal CoM (-5.7, -2.3, 3.1) Å (Thu Aug 1 13:41:34 2019)
  • reduced center failed (Thu Aug 1 13:41:34 2019)
  • volume analysis completed in 0.56 sec (Thu Aug 1 13:41:34 2019)
  • compressing 2019.aug01.f79-2.5.mrc (Thu Aug 1 13:41:34 2019)
  • starting probe size 2.600 (Thu Aug 1 13:41:34 2019)
  • running 3v volume program (Thu Aug 1 13:41:34 2019)
  • smoothing out volume (Thu Aug 1 13:41:34 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:41:34 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:41:38 2019)
  • compressing 2019.aug01.f79-2.6.obj (Thu Aug 1 13:41:38 2019)
  • UCSF Chimera completed in 4.71 sec (Thu Aug 1 13:41:38 2019)
  • analyzing volume (Thu Aug 1 13:41:38 2019)
  • normal CoM (-5.5, -2.3, 3.0) Å (Thu Aug 1 13:41:39 2019)
  • reduced center failed (Thu Aug 1 13:41:39 2019)
  • volume analysis completed in 0.57 sec (Thu Aug 1 13:41:39 2019)
  • compressing 2019.aug01.f79-2.6.mrc (Thu Aug 1 13:41:39 2019)
  • starting probe size 2.700 (Thu Aug 1 13:41:39 2019)
  • running 3v volume program (Thu Aug 1 13:41:39 2019)
  • smoothing out volume (Thu Aug 1 13:41:39 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:41:39 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:41:44 2019)
  • compressing 2019.aug01.f79-2.7.obj (Thu Aug 1 13:41:44 2019)
  • UCSF Chimera completed in 4.7 sec (Thu Aug 1 13:41:44 2019)
  • analyzing volume (Thu Aug 1 13:41:44 2019)
  • normal CoM (-5.5, -2.3, 2.9) Å (Thu Aug 1 13:41:44 2019)
  • reduced center failed (Thu Aug 1 13:41:44 2019)
  • volume analysis completed in 0.57 sec (Thu Aug 1 13:41:44 2019)
  • compressing 2019.aug01.f79-2.7.mrc (Thu Aug 1 13:41:44 2019)
  • starting probe size 2.800 (Thu Aug 1 13:41:45 2019)
  • running 3v volume program (Thu Aug 1 13:41:45 2019)
  • smoothing out volume (Thu Aug 1 13:41:45 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:41:45 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:41:49 2019)
  • compressing 2019.aug01.f79-2.8.obj (Thu Aug 1 13:41:49 2019)
  • UCSF Chimera completed in 4.74 sec (Thu Aug 1 13:41:49 2019)
  • analyzing volume (Thu Aug 1 13:41:49 2019)
  • normal CoM (-5.4, -2.3, 2.7) Å (Thu Aug 1 13:41:50 2019)
  • reduced center failed (Thu Aug 1 13:41:50 2019)
  • volume analysis completed in 0.55 sec (Thu Aug 1 13:41:50 2019)
  • compressing 2019.aug01.f79-2.8.mrc (Thu Aug 1 13:41:50 2019)
  • starting probe size 2.900 (Thu Aug 1 13:41:50 2019)
  • running 3v volume program (Thu Aug 1 13:41:50 2019)
  • smoothing out volume (Thu Aug 1 13:41:50 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:41:50 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:41:55 2019)
  • compressing 2019.aug01.f79-2.9.obj (Thu Aug 1 13:41:55 2019)
  • UCSF Chimera completed in 4.68 sec (Thu Aug 1 13:41:55 2019)
  • analyzing volume (Thu Aug 1 13:41:55 2019)
  • normal CoM (-5.5, -2.3, 2.8) Å (Thu Aug 1 13:41:55 2019)
  • reduced center failed (Thu Aug 1 13:41:55 2019)
  • volume analysis completed in 0.56 sec (Thu Aug 1 13:41:55 2019)
  • compressing 2019.aug01.f79-2.9.mrc (Thu Aug 1 13:41:55 2019)
  • starting probe size 3.000 (Thu Aug 1 13:41:55 2019)
  • running 3v volume program (Thu Aug 1 13:41:55 2019)
  • smoothing out volume (Thu Aug 1 13:41:55 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:41:55 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:42:00 2019)
  • compressing 2019.aug01.f79-3.0.obj (Thu Aug 1 13:42:00 2019)
  • UCSF Chimera completed in 4.77 sec (Thu Aug 1 13:42:00 2019)
  • analyzing volume (Thu Aug 1 13:42:00 2019)
  • normal CoM (-5.4, -2.2, 2.7) Å (Thu Aug 1 13:42:01 2019)
  • reduced center failed (Thu Aug 1 13:42:01 2019)
  • volume analysis completed in 0.57 sec (Thu Aug 1 13:42:01 2019)
  • compressing 2019.aug01.f79-3.0.mrc (Thu Aug 1 13:42:01 2019)
  • starting probe size 3.100 (Thu Aug 1 13:42:01 2019)
  • running 3v volume program (Thu Aug 1 13:42:01 2019)
  • smoothing out volume (Thu Aug 1 13:42:01 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:42:01 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:42:06 2019)
  • compressing 2019.aug01.f79-3.1.obj (Thu Aug 1 13:42:06 2019)
  • UCSF Chimera completed in 4.64 sec (Thu Aug 1 13:42:06 2019)
  • analyzing volume (Thu Aug 1 13:42:06 2019)
  • normal CoM (-5.6, -2.3, 2.9) Å (Thu Aug 1 13:42:06 2019)
  • reduced center failed (Thu Aug 1 13:42:06 2019)
  • volume analysis completed in 0.57 sec (Thu Aug 1 13:42:06 2019)
  • compressing 2019.aug01.f79-3.1.mrc (Thu Aug 1 13:42:06 2019)
  • starting probe size 3.200 (Thu Aug 1 13:42:06 2019)
  • running 3v volume program (Thu Aug 1 13:42:06 2019)
  • smoothing out volume (Thu Aug 1 13:42:06 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:42:06 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:42:11 2019)
  • compressing 2019.aug01.f79-3.2.obj (Thu Aug 1 13:42:11 2019)
  • UCSF Chimera completed in 4.79 sec (Thu Aug 1 13:42:11 2019)
  • analyzing volume (Thu Aug 1 13:42:11 2019)
  • normal CoM (-1.6, -2.3, -1.1) Å (Thu Aug 1 13:42:12 2019)
  • reduced center failed (Thu Aug 1 13:42:12 2019)
  • volume analysis completed in 0.62 sec (Thu Aug 1 13:42:12 2019)
  • compressing 2019.aug01.f79-3.2.mrc (Thu Aug 1 13:42:12 2019)
  • starting probe size 3.300 (Thu Aug 1 13:42:12 2019)
  • running 3v volume program (Thu Aug 1 13:42:12 2019)
  • smoothing out volume (Thu Aug 1 13:42:12 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:42:12 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:42:16 2019)
  • compressing 2019.aug01.f79-3.3.obj (Thu Aug 1 13:42:16 2019)
  • UCSF Chimera completed in 4.71 sec (Thu Aug 1 13:42:17 2019)
  • analyzing volume (Thu Aug 1 13:42:17 2019)
  • normal CoM (-1.5, -2.3, -1.2) Å (Thu Aug 1 13:42:17 2019)
  • reduced center failed (Thu Aug 1 13:42:17 2019)
  • volume analysis completed in 0.63 sec (Thu Aug 1 13:42:17 2019)
  • compressing 2019.aug01.f79-3.3.mrc (Thu Aug 1 13:42:17 2019)
  • starting probe size 3.400 (Thu Aug 1 13:42:17 2019)
  • running 3v volume program (Thu Aug 1 13:42:17 2019)
  • smoothing out volume (Thu Aug 1 13:42:17 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:42:17 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:42:22 2019)
  • compressing 2019.aug01.f79-3.4.obj (Thu Aug 1 13:42:22 2019)
  • UCSF Chimera completed in 5.01 sec (Thu Aug 1 13:42:22 2019)
  • analyzing volume (Thu Aug 1 13:42:22 2019)
  • normal CoM (-3.5, -2.3, 2.8) Å (Thu Aug 1 13:42:23 2019)
  • reduced center failed (Thu Aug 1 13:42:23 2019)
  • volume analysis completed in 0.66 sec (Thu Aug 1 13:42:23 2019)
  • compressing 2019.aug01.f79-3.4.mrc (Thu Aug 1 13:42:23 2019)
  • starting probe size 3.500 (Thu Aug 1 13:42:23 2019)
  • running 3v volume program (Thu Aug 1 13:42:23 2019)
  • smoothing out volume (Thu Aug 1 13:42:23 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:42:23 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:42:28 2019)
  • compressing 2019.aug01.f79-3.5.obj (Thu Aug 1 13:42:28 2019)
  • UCSF Chimera completed in 4.98 sec (Thu Aug 1 13:42:28 2019)
  • analyzing volume (Thu Aug 1 13:42:28 2019)
  • normal CoM (-3.4, -0.3, 2.8) Å (Thu Aug 1 13:42:29 2019)
  • reduced center failed (Thu Aug 1 13:42:29 2019)
  • volume analysis completed in 0.71 sec (Thu Aug 1 13:42:29 2019)
  • compressing 2019.aug01.f79-3.5.mrc (Thu Aug 1 13:42:29 2019)
  • starting probe size 3.600 (Thu Aug 1 13:42:29 2019)
  • running 3v volume program (Thu Aug 1 13:42:29 2019)
  • smoothing out volume (Thu Aug 1 13:42:29 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:42:29 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:42:34 2019)
  • compressing 2019.aug01.f79-3.6.obj (Thu Aug 1 13:42:34 2019)
  • UCSF Chimera completed in 5.09 sec (Thu Aug 1 13:42:34 2019)
  • analyzing volume (Thu Aug 1 13:42:34 2019)
  • normal CoM (-3.3, -0.2, 2.7) Å (Thu Aug 1 13:42:35 2019)
  • reduced center failed (Thu Aug 1 13:42:35 2019)
  • volume analysis completed in 0.72 sec (Thu Aug 1 13:42:35 2019)
  • compressing 2019.aug01.f79-3.6.mrc (Thu Aug 1 13:42:35 2019)
  • starting probe size 3.700 (Thu Aug 1 13:42:35 2019)
  • running 3v volume program (Thu Aug 1 13:42:35 2019)
  • smoothing out volume (Thu Aug 1 13:42:35 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:42:35 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:42:40 2019)
  • compressing 2019.aug01.f79-3.7.obj (Thu Aug 1 13:42:40 2019)
  • UCSF Chimera completed in 5.11 sec (Thu Aug 1 13:42:40 2019)
  • analyzing volume (Thu Aug 1 13:42:40 2019)
  • normal CoM (-3.4, -0.3, 2.7) Å (Thu Aug 1 13:42:41 2019)
  • reduced center failed (Thu Aug 1 13:42:41 2019)
  • volume analysis completed in 0.73 sec (Thu Aug 1 13:42:41 2019)
  • compressing 2019.aug01.f79-3.7.mrc (Thu Aug 1 13:42:41 2019)
  • starting probe size 3.800 (Thu Aug 1 13:42:41 2019)
  • running 3v volume program (Thu Aug 1 13:42:41 2019)
  • smoothing out volume (Thu Aug 1 13:42:41 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:42:41 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:42:46 2019)
  • compressing 2019.aug01.f79-3.8.obj (Thu Aug 1 13:42:46 2019)
  • UCSF Chimera completed in 5.02 sec (Thu Aug 1 13:42:46 2019)
  • analyzing volume (Thu Aug 1 13:42:46 2019)
  • normal CoM (-3.5, -0.3, 2.7) Å (Thu Aug 1 13:42:47 2019)
  • reduced center failed (Thu Aug 1 13:42:47 2019)
  • volume analysis completed in 0.71 sec (Thu Aug 1 13:42:47 2019)
  • compressing 2019.aug01.f79-3.8.mrc (Thu Aug 1 13:42:47 2019)
  • starting probe size 3.900 (Thu Aug 1 13:42:47 2019)
  • running 3v volume program (Thu Aug 1 13:42:47 2019)
  • smoothing out volume (Thu Aug 1 13:42:47 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:42:47 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:42:52 2019)
  • compressing 2019.aug01.f79-3.9.obj (Thu Aug 1 13:42:52 2019)
  • UCSF Chimera completed in 5.03 sec (Thu Aug 1 13:42:52 2019)
  • analyzing volume (Thu Aug 1 13:42:52 2019)
  • normal CoM (-3.4, -0.3, 2.7) Å (Thu Aug 1 13:42:53 2019)
  • reduced center failed (Thu Aug 1 13:42:53 2019)
  • volume analysis completed in 0.72 sec (Thu Aug 1 13:42:53 2019)
  • compressing 2019.aug01.f79-3.9.mrc (Thu Aug 1 13:42:53 2019)
  • starting probe size 4.000 (Thu Aug 1 13:42:53 2019)
  • running 3v volume program (Thu Aug 1 13:42:53 2019)
  • smoothing out volume (Thu Aug 1 13:42:53 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:42:53 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:42:58 2019)
  • compressing 2019.aug01.f79-4.0.obj (Thu Aug 1 13:42:58 2019)
  • UCSF Chimera completed in 5.13 sec (Thu Aug 1 13:42:58 2019)
  • analyzing volume (Thu Aug 1 13:42:58 2019)
  • normal CoM (-3.3, -0.2, 2.6) Å (Thu Aug 1 13:42:59 2019)
  • reduced center failed (Thu Aug 1 13:42:59 2019)
  • volume analysis completed in 0.72 sec (Thu Aug 1 13:42:59 2019)
  • compressing 2019.aug01.f79-4.0.mrc (Thu Aug 1 13:42:59 2019)
  • starting probe size 4.100 (Thu Aug 1 13:42:59 2019)
  • running 3v volume program (Thu Aug 1 13:42:59 2019)
  • smoothing out volume (Thu Aug 1 13:42:59 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:42:59 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:43:04 2019)
  • compressing 2019.aug01.f79-4.1.obj (Thu Aug 1 13:43:04 2019)
  • UCSF Chimera completed in 5.19 sec (Thu Aug 1 13:43:04 2019)
  • analyzing volume (Thu Aug 1 13:43:04 2019)
  • normal CoM (-3.3, -0.2, 2.6) Å (Thu Aug 1 13:43:05 2019)
  • reduced center failed (Thu Aug 1 13:43:05 2019)
  • volume analysis completed in 0.72 sec (Thu Aug 1 13:43:05 2019)
  • compressing 2019.aug01.f79-4.1.mrc (Thu Aug 1 13:43:05 2019)
  • starting probe size 4.200 (Thu Aug 1 13:43:05 2019)
  • running 3v volume program (Thu Aug 1 13:43:05 2019)
  • smoothing out volume (Thu Aug 1 13:43:05 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:43:05 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:43:10 2019)
  • compressing 2019.aug01.f79-4.2.obj (Thu Aug 1 13:43:10 2019)
  • UCSF Chimera completed in 4.99 sec (Thu Aug 1 13:43:10 2019)
  • analyzing volume (Thu Aug 1 13:43:10 2019)
  • normal CoM (-3.4, -0.2, 2.7) Å (Thu Aug 1 13:43:11 2019)
  • reduced center failed (Thu Aug 1 13:43:11 2019)
  • volume analysis completed in 0.72 sec (Thu Aug 1 13:43:11 2019)
  • compressing 2019.aug01.f79-4.2.mrc (Thu Aug 1 13:43:11 2019)
  • starting probe size 4.300 (Thu Aug 1 13:43:11 2019)
  • running 3v volume program (Thu Aug 1 13:43:11 2019)
  • smoothing out volume (Thu Aug 1 13:43:11 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:43:11 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:43:16 2019)
  • compressing 2019.aug01.f79-4.3.obj (Thu Aug 1 13:43:16 2019)
  • UCSF Chimera completed in 5.09 sec (Thu Aug 1 13:43:16 2019)
  • analyzing volume (Thu Aug 1 13:43:16 2019)
  • normal CoM (-3.4, -0.3, 2.8) Å (Thu Aug 1 13:43:16 2019)
  • reduced center failed (Thu Aug 1 13:43:17 2019)
  • volume analysis completed in 0.71 sec (Thu Aug 1 13:43:17 2019)
  • compressing 2019.aug01.f79-4.3.mrc (Thu Aug 1 13:43:17 2019)
  • starting probe size 4.400 (Thu Aug 1 13:43:17 2019)
  • running 3v volume program (Thu Aug 1 13:43:17 2019)
  • smoothing out volume (Thu Aug 1 13:43:17 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:43:17 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:43:22 2019)
  • compressing 2019.aug01.f79-4.4.obj (Thu Aug 1 13:43:22 2019)
  • UCSF Chimera completed in 5.07 sec (Thu Aug 1 13:43:22 2019)
  • analyzing volume (Thu Aug 1 13:43:22 2019)
  • normal CoM (-3.4, -2.3, 2.7) Å (Thu Aug 1 13:43:23 2019)
  • reduced center failed (Thu Aug 1 13:43:23 2019)
  • volume analysis completed in 0.79 sec (Thu Aug 1 13:43:23 2019)
  • compressing 2019.aug01.f79-4.4.mrc (Thu Aug 1 13:43:23 2019)
  • starting probe size 4.500 (Thu Aug 1 13:43:23 2019)
  • running 3v volume program (Thu Aug 1 13:43:23 2019)
  • smoothing out volume (Thu Aug 1 13:43:23 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:43:23 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:43:28 2019)
  • compressing 2019.aug01.f79-4.5.obj (Thu Aug 1 13:43:28 2019)
  • UCSF Chimera completed in 5.06 sec (Thu Aug 1 13:43:28 2019)
  • analyzing volume (Thu Aug 1 13:43:28 2019)
  • normal CoM (-3.4, -2.3, 2.6) Å (Thu Aug 1 13:43:29 2019)
  • reduced center failed (Thu Aug 1 13:43:29 2019)
  • volume analysis completed in 0.8 sec (Thu Aug 1 13:43:29 2019)
  • compressing 2019.aug01.f79-4.5.mrc (Thu Aug 1 13:43:29 2019)
  • starting probe size 4.600 (Thu Aug 1 13:43:29 2019)
  • running 3v volume program (Thu Aug 1 13:43:29 2019)
  • smoothing out volume (Thu Aug 1 13:43:29 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:43:29 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:43:34 2019)
  • compressing 2019.aug01.f79-4.6.obj (Thu Aug 1 13:43:34 2019)
  • UCSF Chimera completed in 5.05 sec (Thu Aug 1 13:43:34 2019)
  • analyzing volume (Thu Aug 1 13:43:34 2019)
  • normal CoM (-3.4, -2.3, 2.7) Å (Thu Aug 1 13:43:35 2019)
  • reduced center failed (Thu Aug 1 13:43:35 2019)
  • volume analysis completed in 0.79 sec (Thu Aug 1 13:43:35 2019)
  • compressing 2019.aug01.f79-4.6.mrc (Thu Aug 1 13:43:35 2019)
  • starting probe size 4.700 (Thu Aug 1 13:43:35 2019)
  • running 3v volume program (Thu Aug 1 13:43:35 2019)
  • smoothing out volume (Thu Aug 1 13:43:35 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:43:35 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:43:40 2019)
  • compressing 2019.aug01.f79-4.7.obj (Thu Aug 1 13:43:40 2019)
  • UCSF Chimera completed in 5.07 sec (Thu Aug 1 13:43:40 2019)
  • analyzing volume (Thu Aug 1 13:43:40 2019)
  • normal CoM (-3.4, -2.2, 2.7) Å (Thu Aug 1 13:43:41 2019)
  • reduced center failed (Thu Aug 1 13:43:41 2019)
  • volume analysis completed in 0.79 sec (Thu Aug 1 13:43:41 2019)
  • compressing 2019.aug01.f79-4.7.mrc (Thu Aug 1 13:43:41 2019)
  • starting probe size 4.800 (Thu Aug 1 13:43:41 2019)
  • running 3v volume program (Thu Aug 1 13:43:41 2019)
  • smoothing out volume (Thu Aug 1 13:43:41 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:43:41 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:43:46 2019)
  • compressing 2019.aug01.f79-4.8.obj (Thu Aug 1 13:43:46 2019)
  • UCSF Chimera completed in 5.07 sec (Thu Aug 1 13:43:46 2019)
  • analyzing volume (Thu Aug 1 13:43:46 2019)
  • normal CoM (-3.3, -2.2, 2.6) Å (Thu Aug 1 13:43:47 2019)
  • reduced center failed (Thu Aug 1 13:43:47 2019)
  • volume analysis completed in 0.78 sec (Thu Aug 1 13:43:47 2019)
  • compressing 2019.aug01.f79-4.8.mrc (Thu Aug 1 13:43:47 2019)
  • starting probe size 4.900 (Thu Aug 1 13:43:47 2019)
  • running 3v volume program (Thu Aug 1 13:43:47 2019)
  • smoothing out volume (Thu Aug 1 13:43:47 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:43:47 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:43:52 2019)
  • compressing 2019.aug01.f79-4.9.obj (Thu Aug 1 13:43:52 2019)
  • UCSF Chimera completed in 5.15 sec (Thu Aug 1 13:43:52 2019)
  • analyzing volume (Thu Aug 1 13:43:52 2019)
  • normal CoM (-3.3, -2.2, 2.6) Å (Thu Aug 1 13:43:53 2019)
  • reduced center failed (Thu Aug 1 13:43:53 2019)
  • volume analysis completed in 0.79 sec (Thu Aug 1 13:43:53 2019)
  • compressing 2019.aug01.f79-4.9.mrc (Thu Aug 1 13:43:53 2019)
  • starting probe size 5.000 (Thu Aug 1 13:43:53 2019)
  • running 3v volume program (Thu Aug 1 13:43:53 2019)
  • smoothing out volume (Thu Aug 1 13:43:53 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:43:53 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:43:58 2019)
  • compressing 2019.aug01.f79-5.0.obj (Thu Aug 1 13:43:58 2019)
  • UCSF Chimera completed in 4.83 sec (Thu Aug 1 13:43:58 2019)
  • analyzing volume (Thu Aug 1 13:43:58 2019)
  • normal CoM (-5.3, -2.2, 2.6) Å (Thu Aug 1 13:43:59 2019)
  • reduced center failed (Thu Aug 1 13:43:59 2019)
  • volume analysis completed in 0.96 sec (Thu Aug 1 13:43:59 2019)
  • compressing 2019.aug01.f79-5.0.mrc (Thu Aug 1 13:43:59 2019)
  • starting probe size 5.100 (Thu Aug 1 13:43:59 2019)
  • running 3v volume program (Thu Aug 1 13:43:59 2019)
  • smoothing out volume (Thu Aug 1 13:43:59 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:43:59 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:44:04 2019)
  • compressing 2019.aug01.f79-5.1.obj (Thu Aug 1 13:44:04 2019)
  • UCSF Chimera completed in 4.76 sec (Thu Aug 1 13:44:04 2019)
  • analyzing volume (Thu Aug 1 13:44:04 2019)
  • normal CoM (-5.3, -2.3, 2.7) Å (Thu Aug 1 13:44:05 2019)
  • reduced center failed (Thu Aug 1 13:44:05 2019)
  • volume analysis completed in 0.84 sec (Thu Aug 1 13:44:05 2019)
  • compressing 2019.aug01.f79-5.1.mrc (Thu Aug 1 13:44:05 2019)
  • starting probe size 5.200 (Thu Aug 1 13:44:05 2019)
  • running 3v volume program (Thu Aug 1 13:44:05 2019)
  • smoothing out volume (Thu Aug 1 13:44:05 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:44:05 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:44:10 2019)
  • compressing 2019.aug01.f79-5.2.obj (Thu Aug 1 13:44:10 2019)
  • UCSF Chimera completed in 4.8 sec (Thu Aug 1 13:44:10 2019)
  • analyzing volume (Thu Aug 1 13:44:10 2019)
  • normal CoM (-5.4, -2.3, 2.7) Å (Thu Aug 1 13:44:11 2019)
  • reduced center failed (Thu Aug 1 13:44:11 2019)
  • volume analysis completed in 0.84 sec (Thu Aug 1 13:44:11 2019)
  • compressing 2019.aug01.f79-5.2.mrc (Thu Aug 1 13:44:11 2019)
  • starting probe size 5.300 (Thu Aug 1 13:44:11 2019)
  • running 3v volume program (Thu Aug 1 13:44:11 2019)
  • smoothing out volume (Thu Aug 1 13:44:11 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:44:11 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:44:16 2019)
  • compressing 2019.aug01.f79-5.3.obj (Thu Aug 1 13:44:16 2019)
  • UCSF Chimera completed in 4.83 sec (Thu Aug 1 13:44:16 2019)
  • analyzing volume (Thu Aug 1 13:44:16 2019)
  • normal CoM (-5.2, -2.2, 2.5) Å (Thu Aug 1 13:44:17 2019)
  • reduced center failed (Thu Aug 1 13:44:17 2019)
  • volume analysis completed in 0.84 sec (Thu Aug 1 13:44:17 2019)
  • compressing 2019.aug01.f79-5.3.mrc (Thu Aug 1 13:44:17 2019)
  • starting probe size 5.400 (Thu Aug 1 13:44:17 2019)
  • running 3v volume program (Thu Aug 1 13:44:17 2019)
  • smoothing out volume (Thu Aug 1 13:44:17 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:44:17 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:44:22 2019)
  • compressing 2019.aug01.f79-5.4.obj (Thu Aug 1 13:44:22 2019)
  • UCSF Chimera completed in 4.74 sec (Thu Aug 1 13:44:22 2019)
  • analyzing volume (Thu Aug 1 13:44:22 2019)
  • normal CoM (-5.3, -2.2, 2.6) Å (Thu Aug 1 13:44:23 2019)
  • reduced center failed (Thu Aug 1 13:44:23 2019)
  • volume analysis completed in 0.83 sec (Thu Aug 1 13:44:23 2019)
  • compressing 2019.aug01.f79-5.4.mrc (Thu Aug 1 13:44:23 2019)
  • starting probe size 5.500 (Thu Aug 1 13:44:23 2019)
  • running 3v volume program (Thu Aug 1 13:44:23 2019)
  • smoothing out volume (Thu Aug 1 13:44:23 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:44:23 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:44:28 2019)
  • compressing 2019.aug01.f79-5.5.obj (Thu Aug 1 13:44:28 2019)
  • UCSF Chimera completed in 4.78 sec (Thu Aug 1 13:44:28 2019)
  • analyzing volume (Thu Aug 1 13:44:28 2019)
  • normal CoM (-5.3, -2.2, 2.7) Å (Thu Aug 1 13:44:29 2019)
  • reduced center failed (Thu Aug 1 13:44:29 2019)
  • volume analysis completed in 0.84 sec (Thu Aug 1 13:44:29 2019)
  • compressing 2019.aug01.f79-5.5.mrc (Thu Aug 1 13:44:29 2019)
  • starting probe size 5.600 (Thu Aug 1 13:44:29 2019)
  • running 3v volume program (Thu Aug 1 13:44:29 2019)
  • smoothing out volume (Thu Aug 1 13:44:29 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:44:29 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:44:34 2019)
  • compressing 2019.aug01.f79-5.6.obj (Thu Aug 1 13:44:34 2019)
  • UCSF Chimera completed in 4.83 sec (Thu Aug 1 13:44:34 2019)
  • analyzing volume (Thu Aug 1 13:44:34 2019)
  • normal CoM (-5.2, -2.2, 2.6) Å (Thu Aug 1 13:44:34 2019)
  • reduced center failed (Thu Aug 1 13:44:35 2019)
  • volume analysis completed in 0.82 sec (Thu Aug 1 13:44:35 2019)
  • compressing 2019.aug01.f79-5.6.mrc (Thu Aug 1 13:44:35 2019)
  • starting probe size 5.700 (Thu Aug 1 13:44:35 2019)
  • running 3v volume program (Thu Aug 1 13:44:35 2019)
  • smoothing out volume (Thu Aug 1 13:44:35 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:44:35 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:44:40 2019)
  • compressing 2019.aug01.f79-5.7.obj (Thu Aug 1 13:44:40 2019)
  • UCSF Chimera completed in 4.88 sec (Thu Aug 1 13:44:40 2019)
  • analyzing volume (Thu Aug 1 13:44:40 2019)
  • normal CoM (-5.2, -2.2, 2.5) Å (Thu Aug 1 13:44:40 2019)
  • reduced center failed (Thu Aug 1 13:44:40 2019)
  • volume analysis completed in 0.83 sec (Thu Aug 1 13:44:40 2019)
  • compressing 2019.aug01.f79-5.7.mrc (Thu Aug 1 13:44:40 2019)
  • starting probe size 5.800 (Thu Aug 1 13:44:41 2019)
  • running 3v volume program (Thu Aug 1 13:44:41 2019)
  • smoothing out volume (Thu Aug 1 13:44:41 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:44:41 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:44:45 2019)
  • compressing 2019.aug01.f79-5.8.obj (Thu Aug 1 13:44:45 2019)
  • UCSF Chimera completed in 4.94 sec (Thu Aug 1 13:44:46 2019)
  • analyzing volume (Thu Aug 1 13:44:46 2019)
  • normal CoM (-5.3, -2.2, 2.6) Å (Thu Aug 1 13:44:46 2019)
  • reduced center failed (Thu Aug 1 13:44:46 2019)
  • volume analysis completed in 0.84 sec (Thu Aug 1 13:44:46 2019)
  • compressing 2019.aug01.f79-5.8.mrc (Thu Aug 1 13:44:46 2019)
  • starting probe size 5.900 (Thu Aug 1 13:44:46 2019)
  • running 3v volume program (Thu Aug 1 13:44:46 2019)
  • smoothing out volume (Thu Aug 1 13:44:47 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:44:47 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:44:51 2019)
  • compressing 2019.aug01.f79-5.9.obj (Thu Aug 1 13:44:51 2019)
  • UCSF Chimera completed in 4.86 sec (Thu Aug 1 13:44:51 2019)
  • analyzing volume (Thu Aug 1 13:44:51 2019)
  • normal CoM (-5.2, -2.2, 2.5) Å (Thu Aug 1 13:44:52 2019)
  • reduced center failed (Thu Aug 1 13:44:52 2019)
  • volume analysis completed in 0.84 sec (Thu Aug 1 13:44:52 2019)
  • compressing 2019.aug01.f79-5.9.mrc (Thu Aug 1 13:44:52 2019)
  • starting probe size 6.000 (Thu Aug 1 13:44:52 2019)
  • running 3v volume program (Thu Aug 1 13:44:52 2019)
  • smoothing out volume (Thu Aug 1 13:44:53 2019)
  • imaging volume (download mrc) with UCSF Chimera (Thu Aug 1 13:44:53 2019)
  • UCSF Chimera created Jmol compatible file (Thu Aug 1 13:44:57 2019)
  • compressing 2019.aug01.f79-6.0.obj (Thu Aug 1 13:44:57 2019)
  • UCSF Chimera completed in 4.93 sec (Thu Aug 1 13:44:57 2019)
  • analyzing volume (Thu Aug 1 13:44:57 2019)
  • normal CoM (-5.2, -2.2, 2.5) Å (Thu Aug 1 13:44:58 2019)
  • reduced center failed (Thu Aug 1 13:44:58 2019)
  • volume analysis completed in 0.84 sec (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-6.0.mrc (Thu Aug 1 13:44:58 2019)
  • tarring file list (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-0.0.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-0.1.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-0.2.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-0.3.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-0.4.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-0.5.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-0.6.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-0.7.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-0.8.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-0.9.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-1.0.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-1.1.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-1.2.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-1.3.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-1.4.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-1.5.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-1.6.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-1.7.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-1.8.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-1.9.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-2.0.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-2.1.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-2.2.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-2.3.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-2.4.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-2.5.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-2.6.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-2.7.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-2.8.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-2.9.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-3.0.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-3.1.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-3.2.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-3.3.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-3.4.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-3.5.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-3.6.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-3.7.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-3.8.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-3.9.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-4.0.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-4.1.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-4.2.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-4.3.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-4.4.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-4.5.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-4.6.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-4.7.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-4.8.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-4.9.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-5.0.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-5.1.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-5.2.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-5.3.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-5.4.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-5.5.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-5.6.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-5.7.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-5.8.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-5.9.mrc (Thu Aug 1 13:44:58 2019)
  • compressing 2019.aug01.f79-6.0.mrc (Thu Aug 1 13:44:58 2019)
  • FINISHED (Thu Aug 1 13:44:58 2019)

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Log file display

Show last lines of log file 
Terminal display
		
compressing 2019.aug01.f79-4.2.mrc 
Message: compressing 2019.aug01.f79-4.3.mrc 
Message: compressing 2019.aug01.f79-4.4.mrc 
Message: compressing 2019.aug01.f79-4.5.mrc 
Message: compressing 2019.aug01.f79-4.6.mrc 
Message: compressing 2019.aug01.f79-4.7.mrc 
Message: compressing 2019.aug01.f79-4.8.mrc 
Message: compressing 2019.aug01.f79-4.9.mrc 
Message: compressing 2019.aug01.f79-5.0.mrc 
Message: compressing 2019.aug01.f79-5.1.mrc 
Message: compressing 2019.aug01.f79-5.2.mrc 
Message: compressing 2019.aug01.f79-5.3.mrc 
Message: compressing 2019.aug01.f79-5.4.mrc 
Message: compressing 2019.aug01.f79-5.5.mrc 
Message: compressing 2019.aug01.f79-5.6.mrc 
Message: compressing 2019.aug01.f79-5.7.mrc 
Message: compressing 2019.aug01.f79-5.8.mrc 
Message: compressing 2019.aug01.f79-5.9.mrc 
Message: compressing 2019.aug01.f79-6.0.mrc 
Message: FINISHED 
		


Citation:
'3V: cavity, channel and cleft volume calculator and extractor' (free text)
Nucleic Acids Res. 2010 July 1; 38(Web Server issue): W555–W562
by Neil R. Voss and Mark Gerstein
Download source code
Help
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If you find this useful or want more functionality please contact Neil <vossman77 [at] gmail [dot] com>
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