3v Results for JobId '2019.jan19.297'

Run Information

biological unit: no
use hetero atoms: no
allow public display: no
grid resolution: high
probestep: 3.0
minprobe: 0.0
pymol: False
waterpdb: False
pdbfile: /var/www/html/3vee/output/uploads/2019.jan19.297.pdb
maxprobe: 9.0



Show running log


Images of your surface at probe size: 0.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 17823 Å3
Surface area: 16125 Å2
Sphericity, Ψ: 0.20
Effective radius: 3.32 Å
Center of Mass: (1.9, 0.1, -3.3) Å

Downloadable files of your surface:




Images of your surface at probe size: 3.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 25845 Å3
Surface area: 5708 Å2
Sphericity, Ψ: 0.74
Effective radius: 13.58 Å
Center of Mass: (2.0, 0.2, -3.4) Å

Downloadable files of your surface:




Images of your surface at probe size: 6.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 27880 Å3
Surface area: 5430 Å2
Sphericity, Ψ: 0.82
Effective radius: 15.40 Å
Center of Mass: (2.1, -0.8, -3.5) Å

Downloadable files of your surface:




Images of your surface at probe size: 9.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 29002 Å3
Surface area: 5349 Å2
Sphericity, Ψ: 0.85
Effective radius: 16.26 Å
Center of Mass: (2.2, 0.2, -3.5) Å

Downloadable files of your surface:



Downloadable files of your surface:

Show running log



Citation:
'3V: cavity, channel and cleft volume calculator and extractor' (free text)
Nucleic Acids Res. 2010 July 1; 38(Web Server issue): W555–W562
by Neil R. Voss and Mark Gerstein
Download source code
Help
Site news and updates
If you find this useful or want more functionality please contact Neil <vossman77 [at] gmail [dot] com>
back to main page