3v Results for JobId '2020.jul29.15e'

Run Information

biological unit: no
use hetero atoms: no
allow public display: no
grid resolution: high
probestep: 5.0
minprobe: 0.0
pymol: True
waterpdb: True
pdbfile: /var/www/html/3vee/output/uploads/2020.jul29.15e.pdb
maxprobe: 40.0



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Images of your surface at probe size: 0.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 51283 Å3
Surface area: 46051 Å2
Sphericity, Ψ: 0.14
Effective radius: 3.34 Å
Center of Mass: (-16.4, 2.7, 28.1) Å

Downloadable files of your surface:




Images of your surface at probe size: 5.000:

           
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Volume Information

Voxel size: 0.5 Å
Volume: 89488 Å3
Surface area: 22079 Å2
Sphericity, Ψ: 0.44
Effective radius: 12.16 Å
Center of Mass: (-15.4, 3.5, 26.8) Å

Downloadable files of your surface:




Images of your surface at probe size: 10.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 116099 Å3
Surface area: 19778 Å2
Sphericity, Ψ: 0.58
Effective radius: 17.61 Å
Center of Mass: (-16.4, 2.1, 28.5) Å

Downloadable files of your surface:




Images of your surface at probe size: 15.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 128796 Å3
Surface area: 18976 Å2
Sphericity, Ψ: 0.65
Effective radius: 20.36 Å
Center of Mass: (-15.4, 2.8, 27.4) Å

Downloadable files of your surface:




Images of your surface at probe size: 20.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 137399 Å3
Surface area: 18766 Å2
Sphericity, Ψ: 0.69
Effective radius: 21.97 Å
Center of Mass: (-16.4, 1.6, 28.3) Å

Downloadable files of your surface:




Images of your surface at probe size: 25.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 144575 Å3
Surface area: 18667 Å2
Sphericity, Ψ: 0.71
Effective radius: 23.23 Å
Center of Mass: (-14.4, 2.6, 25.3) Å

Downloadable files of your surface:




Images of your surface at probe size: 30.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 152078 Å3
Surface area: 18564 Å2
Sphericity, Ψ: 0.74
Effective radius: 24.58 Å
Center of Mass: (-15.6, 1.7, 26.3) Å

Downloadable files of your surface:




Images of your surface at probe size: 35.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 158005 Å3
Surface area: 18561 Å2
Sphericity, Ψ: 0.76
Effective radius: 25.54 Å
Center of Mass: (-14.7, 2.7, 25.3) Å

Downloadable files of your surface:




Images of your surface at probe size: 40.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 162565 Å3
Surface area: 18623 Å2
Sphericity, Ψ: 0.77
Effective radius: 26.19 Å
Center of Mass: (-15.8, 1.7, 26.3) Å

Downloadable files of your surface:



Downloadable files of your surface:

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Citation:
'3V: cavity, channel and cleft volume calculator and extractor' (free text)
Nucleic Acids Res. 2010 July 1; 38(Web Server issue): W555–W562
by Neil R. Voss and Mark Gerstein
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