3v Results for JobId '2020.jun23.48f'

Run Information

biological unit: no
use hetero atoms: no
allow public display: no
grid resolution: high
probestep: 3.0
minprobe: 0.0
pymol: False
waterpdb: False
pdbfile: /var/www/html/3vee/output/uploads/2020.jun23.48f.pdb
maxprobe: 9.0



Show running log


Images of your surface at probe size: 0.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 392 Å3
Surface area: 409 Å2
Sphericity, Ψ: 0.63
Effective radius: 2.88 Å
Center of Mass: (-1.6, -1.1, -0.2) Å

Downloadable files of your surface:




Images of your surface at probe size: 3.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 535 Å3
Surface area: 380 Å2
Sphericity, Ψ: 0.84
Effective radius: 4.22 Å
Center of Mass: (-2.5, -1.2, -0.1) Å

Downloadable files of your surface:




Images of your surface at probe size: 6.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 584 Å3
Surface area: 388 Å2
Sphericity, Ψ: 0.87
Effective radius: 4.52 Å
Center of Mass: (-1.5, -1.2, -0.1) Å

Downloadable files of your surface:




Images of your surface at probe size: 9.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 601 Å3
Surface area: 382 Å2
Sphericity, Ψ: 0.90
Effective radius: 4.72 Å
Center of Mass: (-2.5, -1.2, -0.1) Å

Downloadable files of your surface:



Downloadable files of your surface:

Show running log



Citation:
'3V: cavity, channel and cleft volume calculator and extractor' (free text)
Nucleic Acids Res. 2010 July 1; 38(Web Server issue): W555–W562
by Neil R. Voss and Mark Gerstein
Download source code
Help
Site news and updates
If you find this useful or want more functionality please contact Neil <vossman77 [at] gmail [dot] com>
back to main page