3v Results for JobId '2020.mar18.2cc'

Run Information

PDB id: 3dhs 
biological unit: no
use hetero atoms: no
allow public display: no
grid resolution: medium
probestep: 10.0
minprobe: 0.0
pymol: True
waterpdb: False
maxprobe: 80.0



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Images of your surface at probe size: 0.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.8 Å
Volume: 50506 Å3
Surface area: 43434 Å2
Sphericity, Ψ: 0.15
Effective radius: 3.49 Å
Center of Mass: (-6.5, -1.4, 1.3) Å

Downloadable files of your surface:




Images of your surface at probe size: 10.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.8 Å
Volume: 122131 Å3
Surface area: 17984 Å2
Sphericity, Ψ: 0.66
Effective radius: 20.37 Å
Center of Mass: (-6.3, -0.9, 0.6) Å

Downloadable files of your surface:




Images of your surface at probe size: 20.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.8 Å
Volume: 139187 Å3
Surface area: 17861 Å2
Sphericity, Ψ: 0.73
Effective radius: 23.38 Å
Center of Mass: (-3.5, -0.9, -1.6) Å

Downloadable files of your surface:




Images of your surface at probe size: 30.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.8 Å
Volume: 153259 Å3
Surface area: 17948 Å2
Sphericity, Ψ: 0.77
Effective radius: 25.62 Å
Center of Mass: (-6.4, -0.8, -1.0) Å

Downloadable files of your surface:




Images of your surface at probe size: 40.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.8 Å
Volume: 162032 Å3
Surface area: 18131 Å2
Sphericity, Ψ: 0.79
Effective radius: 26.81 Å
Center of Mass: (-6.4, -0.7, -1.4) Å

Downloadable files of your surface:




Images of your surface at probe size: 50.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.8 Å
Volume: 169779 Å3
Surface area: 18344 Å2
Sphericity, Ψ: 0.81
Effective radius: 27.77 Å
Center of Mass: (-3.2, -2.3, -3.2) Å

Downloadable files of your surface:




Images of your surface at probe size: 60.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.8 Å
Volume: 177550 Å3
Surface area: 18482 Å2
Sphericity, Ψ: 0.83
Effective radius: 28.82 Å
Center of Mass: (-5.9, -2.5, -1.9) Å

Downloadable files of your surface:




Images of your surface at probe size: 70.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.8 Å
Volume: 182741 Å3
Surface area: 18632 Å2
Sphericity, Ψ: 0.84
Effective radius: 29.42 Å
Center of Mass: (-5.7, -2.6, -2.0) Å

Downloadable files of your surface:




Images of your surface at probe size: 80.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.8 Å
Volume: 187379 Å3
Surface area: 18751 Å2
Sphericity, Ψ: 0.84
Effective radius: 29.98 Å
Center of Mass: (-2.6, -2.7, -3.7) Å

Downloadable files of your surface:



Downloadable files of your surface:

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Citation:
'3V: cavity, channel and cleft volume calculator and extractor' (free text)
Nucleic Acids Res. 2010 July 1; 38(Web Server issue): W555–W562
by Neil R. Voss and Mark Gerstein
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