3v Results for JobId '2020.mar22.d5a'

Run Information

PDB id: 6pom 
biological unit: no
use hetero atoms: no
allow public display: no
grid resolution: low
probestep: 10.0
minprobe: 0.0
pymol: False
waterpdb: False
maxprobe: 80.0



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Images of your surface at probe size: 0.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 1.0 Å
Volume: 54067 Å3
Surface area: 45597 Å2
Sphericity, Ψ: 0.15
Effective radius: 3.56 Å
Center of Mass: (-4.1, -0.9, 4.3) Å

Downloadable files of your surface:




Images of your surface at probe size: 10.000:

           
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Volume Information

Voxel size: 1.0 Å
Volume: 123969 Å3
Surface area: 20684 Å2
Sphericity, Ψ: 0.58
Effective radius: 17.98 Å
Center of Mass: (0.1, 1.2, 0.1) Å

Downloadable files of your surface:




Images of your surface at probe size: 20.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 1.0 Å
Volume: 142046 Å3
Surface area: 20904 Å2
Sphericity, Ψ: 0.63
Effective radius: 20.38 Å
Center of Mass: (-4.7, -0.2, 4.0) Å

Downloadable files of your surface:




Images of your surface at probe size: 30.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 1.0 Å
Volume: 154652 Å3
Surface area: 20777 Å2
Sphericity, Ψ: 0.67
Effective radius: 22.33 Å
Center of Mass: (-1.3, 2.2, -0.1) Å

Downloadable files of your surface:




Images of your surface at probe size: 40.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 1.0 Å
Volume: 165161 Å3
Surface area: 20806 Å2
Sphericity, Ψ: 0.70
Effective radius: 23.81 Å
Center of Mass: (-3.8, 0.6, -0.2) Å

Downloadable files of your surface:




Images of your surface at probe size: 50.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 1.0 Å
Volume: 174298 Å3
Surface area: 20800 Å2
Sphericity, Ψ: 0.73
Effective radius: 25.14 Å
Center of Mass: (-4.3, 1.0, -2.5) Å

Downloadable files of your surface:




Images of your surface at probe size: 60.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 1.0 Å
Volume: 181269 Å3
Surface area: 20879 Å2
Sphericity, Ψ: 0.74
Effective radius: 26.05 Å
Center of Mass: (-8.5, -0.8, 1.4) Å

Downloadable files of your surface:




Images of your surface at probe size: 70.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 1.0 Å
Volume: 186084 Å3
Surface area: 20946 Å2
Sphericity, Ψ: 0.75
Effective radius: 26.65 Å
Center of Mass: (-4.8, 1.4, -2.7) Å

Downloadable files of your surface:




Images of your surface at probe size: 80.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 1.0 Å
Volume: 190443 Å3
Surface area: 21058 Å2
Sphericity, Ψ: 0.76
Effective radius: 27.13 Å
Center of Mass: (-8.9, -0.5, 1.2) Å

Downloadable files of your surface:



Downloadable files of your surface:

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Citation:
'3V: cavity, channel and cleft volume calculator and extractor' (free text)
Nucleic Acids Res. 2010 July 1; 38(Web Server issue): W555–W562
by Neil R. Voss and Mark Gerstein
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