3v Results for JobId '2020.nov19.503'

Run Information

biological unit: no
use hetero atoms: no
allow public display: no
grid resolution: low
probestep: 10.0
minprobe: 0.0
pymol: False
waterpdb: False
pdbfile: /var/www/html/3vee/output/uploads/2020.nov19.503.pdb
maxprobe: 80.0



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Images of your surface at probe size: 0.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 1.0 Å
Volume: 63041 Å3
Surface area: 53765 Å2
Sphericity, Ψ: 0.14
Effective radius: 3.52 Å
Center of Mass: (6.4, 12.3, -14.9) Å

Downloadable files of your surface:




Images of your surface at probe size: 10.000:

           
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Volume Information

Voxel size: 1.0 Å
Volume: 156352 Å3
Surface area: 23702 Å2
Sphericity, Ψ: 0.59
Effective radius: 19.79 Å
Center of Mass: (2.1, 10.7, -13.1) Å

Downloadable files of your surface:




Images of your surface at probe size: 20.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 1.0 Å
Volume: 184978 Å3
Surface area: 23531 Å2
Sphericity, Ψ: 0.67
Effective radius: 23.58 Å
Center of Mass: (5.9, 12.1, -15.1) Å

Downloadable files of your surface:




Images of your surface at probe size: 30.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 1.0 Å
Volume: 206090 Å3
Surface area: 23961 Å2
Sphericity, Ψ: 0.70
Effective radius: 25.80 Å
Center of Mass: (1.7, 9.1, -12.7) Å

Downloadable files of your surface:




Images of your surface at probe size: 40.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 1.0 Å
Volume: 224678 Å3
Surface area: 24357 Å2
Sphericity, Ψ: 0.73
Effective radius: 27.67 Å
Center of Mass: (5.9, 10.1, -14.4) Å

Downloadable files of your surface:




Images of your surface at probe size: 50.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 1.0 Å
Volume: 238809 Å3
Surface area: 24636 Å2
Sphericity, Ψ: 0.76
Effective radius: 29.08 Å
Center of Mass: (2.1, 7.4, -12.1) Å

Downloadable files of your surface:




Images of your surface at probe size: 60.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 1.0 Å
Volume: 251687 Å3
Surface area: 24909 Å2
Sphericity, Ψ: 0.77
Effective radius: 30.31 Å
Center of Mass: (6.4, 8.8, -14.0) Å

Downloadable files of your surface:




Images of your surface at probe size: 70.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 1.0 Å
Volume: 260412 Å3
Surface area: 25070 Å2
Sphericity, Ψ: 0.79
Effective radius: 31.16 Å
Center of Mass: (2.5, 6.4, -11.9) Å

Downloadable files of your surface:




Images of your surface at probe size: 80.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 1.0 Å
Volume: 269330 Å3
Surface area: 25236 Å2
Sphericity, Ψ: 0.80
Effective radius: 32.02 Å
Center of Mass: (6.7, 8.0, -13.9) Å

Downloadable files of your surface:



Downloadable files of your surface:

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Citation:
'3V: cavity, channel and cleft volume calculator and extractor' (free text)
Nucleic Acids Res. 2010 July 1; 38(Web Server issue): W555–W562
by Neil R. Voss and Mark Gerstein
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