3v Results for JobId '2020.sep15.7b9'

Run Information

biological unit: no
use hetero atoms: no
allow public display: no
grid resolution: low
probestep: 3.0
minprobe: 0.0
pymol: False
waterpdb: False
pdbfile: /var/www/html/3vee/output/uploads/2020.sep15.7b9.pdb
maxprobe: 9.0



Show running log


Images of your surface at probe size: 0.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 1.0 Å
Volume: 56628 Å3
Surface area: 48201 Å2
Sphericity, Ψ: 0.15
Effective radius: 3.52 Å
Center of Mass: (12.7, -3.7, -14.0) Å

Downloadable files of your surface:




Images of your surface at probe size: 3.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 1.0 Å
Volume: 90531 Å3
Surface area: 14145 Å2
Sphericity, Ψ: 0.69
Effective radius: 19.20 Å
Center of Mass: (12.6, -5.6, -11.9) Å

Downloadable files of your surface:




Images of your surface at probe size: 6.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 1.0 Å
Volume: 94658 Å3
Surface area: 12693 Å2
Sphericity, Ψ: 0.79
Effective radius: 22.37 Å
Center of Mass: (10.6, -5.5, -13.9) Å

Downloadable files of your surface:




Images of your surface at probe size: 9.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 1.0 Å
Volume: 99585 Å3
Surface area: 12459 Å2
Sphericity, Ψ: 0.83
Effective radius: 23.98 Å
Center of Mass: (8.6, -3.5, -11.9) Å

Downloadable files of your surface:



Downloadable files of your surface:

Show running log



Citation:
'3V: cavity, channel and cleft volume calculator and extractor' (free text)
Nucleic Acids Res. 2010 July 1; 38(Web Server issue): W555–W562
by Neil R. Voss and Mark Gerstein
Download source code
Help
Site news and updates
If you find this useful or want more functionality please contact Neil <vossman77 [at] gmail [dot] com>
back to main page