3v Results for JobId '2021.feb20.8d9'

Run Information

biological unit: no
use hetero atoms: no
allow public display: no
grid resolution: high
probestep: 3.0
minprobe: 0.0
pymol: False
waterpdb: False
pdbfile: /var/www/html/3vee/output/uploads/2021.feb20.8d9.pdb
maxprobe: 9.0

Show running log


Images of your surface at probe size: 0.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 1258 Å3
Surface area: 1556 Å2
Sphericity, Ψ: 0.36
Effective radius: 2.42 Å
Center of Mass: (-5.2, -4.3, 4.5) Å

Downloadable files of your surface:


Images of your surface at probe size: 3.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 1956 Å3
Surface area: 1135 Å2
Sphericity, Ψ: 0.67
Effective radius: 5.17 Å
Center of Mass: (-3.2, -4.8, 3.9) Å

Downloadable files of your surface:


Images of your surface at probe size: 6.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 2523 Å3
Surface area: 1292 Å2
Sphericity, Ψ: 0.69
Effective radius: 5.86 Å
Center of Mass: (-5.2, -2.1, 3.3) Å

Downloadable files of your surface:


Images of your surface at probe size: 9.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 2785 Å3
Surface area: 1258 Å2
Sphericity, Ψ: 0.76
Effective radius: 6.64 Å
Center of Mass: (-3.2, -1.7, 2.0) Å

Downloadable files of your surface:

Downloadable files of your surface:

Show running log



Citation:
'3V: cavity, channel and cleft volume calculator and extractor' (free text)
Nucleic Acids Res. 2010 July 1; 38(Web Server issue): W555–W562
by Neil R. Voss and Mark Gerstein
Download source code
Help
Site news and updates
If you find this useful or want more functionality please contact Neil <vossman77 [at] gmail [dot] com>
back to main page