3v Results for JobId '2021.jul14.87a'

Run Information

biological unit: no
use hetero atoms: no
allow public display: no
grid resolution: high
probestep: 1.0
minprobe: 0.0
pymol: False
waterpdb: False
pdbfile: /var/www/html/3vee/output/uploads/2021.jul14.87a.pdb
maxprobe: 2.0



Show running log


Images of your surface at probe size: 0.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 696 Å3
Surface area: 755 Å2
Sphericity, Ψ: 0.50
Effective radius: 2.77 Å
Center of Mass: (-2.0, -0.8, 0.9) Å

Downloadable files of your surface:




Images of your surface at probe size: 1.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 972 Å3
Surface area: 714 Å2
Sphericity, Ψ: 0.66
Effective radius: 4.08 Å
Center of Mass: (-2.0, -1.8, 0.9) Å

Downloadable files of your surface:




Images of your surface at probe size: 2.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 998 Å3
Surface area: 689 Å2
Sphericity, Ψ: 0.70
Effective radius: 4.35 Å
Center of Mass: (-2.0, -0.8, 0.9) Å

Downloadable files of your surface:



Downloadable files of your surface:

Show running log



Citation:
'3V: cavity, channel and cleft volume calculator and extractor' (free text)
Nucleic Acids Res. 2010 July 1; 38(Web Server issue): W555–W562
by Neil R. Voss and Mark Gerstein
Download source code
Help
Site news and updates
If you find this useful or want more functionality please contact Neil <vossman77 [at] gmail [dot] com>
back to main page