3v Results for JobId '2022.jun08.4af'

Run Information

biological unit: no
use hetero atoms: no
allow public display: no
grid resolution: high
probestep: 3.0
minprobe: 0.0
pymol: True
waterpdb: True
pdbfile: /var/www/html/3vee/output/uploads/2022.jun08.4af.pdb
maxprobe: 20.0



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Images of your surface at probe size: 0.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 88054 Å3
Surface area: 81349 Å2
Sphericity, Ψ: 0.12
Effective radius: 3.25 Å
Center of Mass: (14.4, 5.2, -13.3) Å

Downloadable files of your surface:




Images of your surface at probe size: 3.000:

           
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Volume Information

Voxel size: 0.5 Å
Volume: 136517 Å3
Surface area: 25750 Å2
Sphericity, Ψ: 0.50
Effective radius: 15.90 Å
Center of Mass: (16.3, 5.2, -14.3) Å

Downloadable files of your surface:




Images of your surface at probe size: 6.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 152506 Å3
Surface area: 22684 Å2
Sphericity, Ψ: 0.61
Effective radius: 20.17 Å
Center of Mass: (14.2, 5.2, -13.3) Å

Downloadable files of your surface:




Images of your surface at probe size: 9.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 161685 Å3
Surface area: 21909 Å2
Sphericity, Ψ: 0.66
Effective radius: 22.14 Å
Center of Mass: (16.1, 5.3, -14.2) Å

Downloadable files of your surface:




Images of your surface at probe size: 12.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 169237 Å3
Surface area: 21565 Å2
Sphericity, Ψ: 0.69
Effective radius: 23.54 Å
Center of Mass: (14.1, 5.3, -13.2) Å

Downloadable files of your surface:




Images of your surface at probe size: 15.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 175654 Å3
Surface area: 21406 Å2
Sphericity, Ψ: 0.71
Effective radius: 24.62 Å
Center of Mass: (15.9, 5.3, -14.1) Å

Downloadable files of your surface:




Images of your surface at probe size: 18.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 181058 Å3
Surface area: 21387 Å2
Sphericity, Ψ: 0.72
Effective radius: 25.40 Å
Center of Mass: (13.9, 5.3, -13.1) Å

Downloadable files of your surface:




Images of your surface at probe size: 21.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 185318 Å3
Surface area: 21409 Å2
Sphericity, Ψ: 0.73
Effective radius: 25.97 Å
Center of Mass: (15.8, 5.3, -14.1) Å

Downloadable files of your surface:



Downloadable files of your surface:

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Citation:
'3V: cavity, channel and cleft volume calculator and extractor' (free text)
Nucleic Acids Res. 2010 July 1; 38(Web Server issue): W555–W562
by Neil R. Voss and Mark Gerstein
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