| 3v Results for JobId '2022.jun23.932' |
Run Information | ||
| biological unit: | no | |
| use hetero atoms: | no | |
| allow public display: | no | |
| grid resolution: | high | |
| smallprobe: | 2.0 | |
| bigprobe: | 10.0 | |
| pymol: | False | |
| waterpdb: | True | |
| pdbfile: | /var/www/html/3vee/output/uploads/2022.jun23.932.pdb | |
| numchan: | 5 | |
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Images of channel 1:
View Volume in Jmol
Volume Information | ||
| Voxel size: | 0.5 Å | |
| Volume: | 3455 Å3 | |
| Surface area: | 2317 Å2 | |
| Sphericity, Ψ: | 0.48 | |
| Effective radius: | 4.47 Å | |
| Center of Mass: | (-20.4, -35.2, -55.1) Å | |
Downloadable files of your surface:
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Images of channel 2:
View Volume in Jmol
Volume Information | ||
| Voxel size: | 0.5 Å | |
| Volume: | 517 Å3 | |
| Surface area: | 442 Å2 | |
| Sphericity, Ψ: | 0.70 | |
| Effective radius: | 3.51 Å | |
| Center of Mass: | (-34.1, -46.5, -64.1) Å | |
Downloadable files of your surface:
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Images of channel 3:
View Volume in Jmol
Volume Information | ||
| Voxel size: | 0.5 Å | |
| Volume: | 712 Å3 | |
| Surface area: | 616 Å2 | |
| Sphericity, Ψ: | 0.63 | |
| Effective radius: | 3.47 Å | |
| Center of Mass: | (-30.7, -45.0, -63.1) Å | |
Downloadable files of your surface:
|
Images of channel 4:
View Volume in Jmol
Volume Information | ||
| Voxel size: | 0.5 Å | |
| Volume: | 464 Å3 | |
| Surface area: | 429 Å2 | |
| Sphericity, Ψ: | 0.68 | |
| Effective radius: | 3.24 Å | |
| Center of Mass: | (-27.1, -46.9, -65.1) Å | |
Downloadable files of your surface:
|
Images of channel 5:
View Volume in Jmol
Volume Information | ||
| Voxel size: | 0.5 Å | |
| Volume: | 305 Å3 | |
| Surface area: | 275 Å2 | |
| Sphericity, Ψ: | 0.80 | |
| Effective radius: | 3.33 Å | |
| Center of Mass: | (-36.5, -46.1, -63.4) Å | |
Downloadable files of your surface:
|
Downloadable files of your surface:
|
Show running log
|
Citation: '3V: cavity, channel and cleft volume calculator and extractor' (free text) Nucleic Acids Res. 2010 July 1; 38(Web Server issue): W555–W562 by Neil R. Voss and Mark Gerstein |
| Download source code |
| Help |
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| If you find this useful or want more functionality please contact Neil <vossman77 [at] gmail [dot] com> |
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