3v Results for JobId '2022.jun23.932'

Run Information

biological unit: no
use hetero atoms: no
allow public display: no
grid resolution: high
smallprobe: 2.0
bigprobe: 10.0
pymol: False
waterpdb: True
pdbfile: /var/www/html/3vee/output/uploads/2022.jun23.932.pdb
numchan: 5



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Images of channel 1:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 3455 Å3
Surface area: 2317 Å2
Sphericity, Ψ: 0.48
Effective radius: 4.47 Å
Center of Mass: (-20.4, -35.2, -55.1) Å

Downloadable files of your surface:




Images of channel 2:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 517 Å3
Surface area: 442 Å2
Sphericity, Ψ: 0.70
Effective radius: 3.51 Å
Center of Mass: (-34.1, -46.5, -64.1) Å

Downloadable files of your surface:




Images of channel 3:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 712 Å3
Surface area: 616 Å2
Sphericity, Ψ: 0.63
Effective radius: 3.47 Å
Center of Mass: (-30.7, -45.0, -63.1) Å

Downloadable files of your surface:




Images of channel 4:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 464 Å3
Surface area: 429 Å2
Sphericity, Ψ: 0.68
Effective radius: 3.24 Å
Center of Mass: (-27.1, -46.9, -65.1) Å

Downloadable files of your surface:




Images of channel 5:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 305 Å3
Surface area: 275 Å2
Sphericity, Ψ: 0.80
Effective radius: 3.33 Å
Center of Mass: (-36.5, -46.1, -63.4) Å

Downloadable files of your surface:



Downloadable files of your surface:

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Citation:
'3V: cavity, channel and cleft volume calculator and extractor' (free text)
Nucleic Acids Res. 2010 July 1; 38(Web Server issue): W555–W562
by Neil R. Voss and Mark Gerstein
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