3v Results for JobId '2022.sep19.a60'

Run Information

biological unit: no
use hetero atoms: no
allow public display: no
grid resolution: low
probestep: 3.0
minprobe: 0.0
pymol: False
waterpdb: False
pdbfile: /var/www/html/3vee/output/uploads/2022.sep19.a60.pdb
maxprobe: 30.0



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Images of your surface at probe size: 0.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 1.0 Å
Volume: 57037 Å3
Surface area: 46768 Å2
Sphericity, Ψ: 0.15
Effective radius: 3.66 Å
Center of Mass: (-12.1, -4.1, 10.4) Å

Downloadable files of your surface:




Images of your surface at probe size: 3.000:

           
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Volume Information

Voxel size: 1.0 Å
Volume: 88746 Å3
Surface area: 14186 Å2
Sphericity, Ψ: 0.68
Effective radius: 18.77 Å
Center of Mass: (-10.0, -3.9, 6.2) Å

Downloadable files of your surface:




Images of your surface at probe size: 6.000:

           
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Volume Information

Voxel size: 1.0 Å
Volume: 93258 Å3
Surface area: 12731 Å2
Sphericity, Ψ: 0.78
Effective radius: 21.98 Å
Center of Mass: (-7.9, -3.9, 6.3) Å

Downloadable files of your surface:




Images of your surface at probe size: 9.000:

           
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Volume Information

Voxel size: 1.0 Å
Volume: 98350 Å3
Surface area: 12458 Å2
Sphericity, Ψ: 0.83
Effective radius: 23.68 Å
Center of Mass: (-7.9, -1.8, 8.5) Å

Downloadable files of your surface:




Images of your surface at probe size: 12.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 1.0 Å
Volume: 101113 Å3
Surface area: 12336 Å2
Sphericity, Ψ: 0.85
Effective radius: 24.59 Å
Center of Mass: (-11.9, -3.8, 10.6) Å

Downloadable files of your surface:




Images of your surface at probe size: 15.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 1.0 Å
Volume: 102784 Å3
Surface area: 12268 Å2
Sphericity, Ψ: 0.86
Effective radius: 25.13 Å
Center of Mass: (-9.9, -3.8, 6.6) Å

Downloadable files of your surface:




Images of your surface at probe size: 18.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 1.0 Å
Volume: 104215 Å3
Surface area: 12233 Å2
Sphericity, Ψ: 0.88
Effective radius: 25.56 Å
Center of Mass: (-7.9, -3.9, 6.6) Å

Downloadable files of your surface:




Images of your surface at probe size: 21.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 1.0 Å
Volume: 105891 Å3
Surface area: 12256 Å2
Sphericity, Ψ: 0.88
Effective radius: 25.92 Å
Center of Mass: (-8.0, -1.9, 8.7) Å

Downloadable files of your surface:




Images of your surface at probe size: 24.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 1.0 Å
Volume: 107121 Å3
Surface area: 12252 Å2
Sphericity, Ψ: 0.89
Effective radius: 26.23 Å
Center of Mass: (-12.0, -3.9, 10.7) Å

Downloadable files of your surface:




Images of your surface at probe size: 27.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 1.0 Å
Volume: 107875 Å3
Surface area: 12299 Å2
Sphericity, Ψ: 0.89
Effective radius: 26.31 Å
Center of Mass: (-10.0, -3.9, 6.7) Å

Downloadable files of your surface:




Images of your surface at probe size: 30.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 1.0 Å
Volume: 108740 Å3
Surface area: 12304 Å2
Sphericity, Ψ: 0.90
Effective radius: 26.51 Å
Center of Mass: (-8.0, -3.9, 6.8) Å

Downloadable files of your surface:



Downloadable files of your surface:

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Citation:
'3V: cavity, channel and cleft volume calculator and extractor' (free text)
Nucleic Acids Res. 2010 July 1; 38(Web Server issue): W555–W562
by Neil R. Voss and Mark Gerstein
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If you find this useful or want more functionality please contact Neil <vossman77 [at] gmail [dot] com>
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