3v Results for JobId '2023.jan23.502'

Run Information

biological unit: no
use hetero atoms: no
allow public display: no
grid resolution: high
probestep: 1.0
minprobe: 0.0
pymol: True
waterpdb: True
pdbfile: /var/www/html/3vee/output/uploads/2023.jan23.502.pdb
maxprobe: 5.0



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Images of your surface at probe size: 0.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 45517 Å3
Surface area: 44451 Å2
Sphericity, Ψ: 0.14
Effective radius: 3.07 Å
Center of Mass: (3.8, -0.8, -5.6) Å

Downloadable files of your surface:




Images of your surface at probe size: 1.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 60318 Å3
Surface area: 41294 Å2
Sphericity, Ψ: 0.18
Effective radius: 4.38 Å
Center of Mass: (1.8, -0.9, -3.6) Å

Downloadable files of your surface:




Images of your surface at probe size: 2.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 62862 Å3
Surface area: 38315 Å2
Sphericity, Ψ: 0.20
Effective radius: 4.92 Å
Center of Mass: (3.8, -1.0, -5.6) Å

Downloadable files of your surface:




Images of your surface at probe size: 3.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 65130 Å3
Surface area: 36923 Å2
Sphericity, Ψ: 0.21
Effective radius: 5.29 Å
Center of Mass: (1.7, -1.1, -3.5) Å

Downloadable files of your surface:




Images of your surface at probe size: 4.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 70970 Å3
Surface area: 36956 Å2
Sphericity, Ψ: 0.22
Effective radius: 5.76 Å
Center of Mass: (3.5, -1.0, -5.4) Å

Downloadable files of your surface:




Images of your surface at probe size: 5.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 75066 Å3
Surface area: 36895 Å2
Sphericity, Ψ: 0.23
Effective radius: 6.10 Å
Center of Mass: (1.4, -0.9, -3.4) Å

Downloadable files of your surface:



Downloadable files of your surface:

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Citation:
'3V: cavity, channel and cleft volume calculator and extractor' (free text)
Nucleic Acids Res. 2010 July 1; 38(Web Server issue): W555–W562
by Neil R. Voss and Mark Gerstein
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