3v Results for JobId '2023.may25.29a'

Run Information

biological unit: no
use hetero atoms: no
allow public display: no
grid resolution: high
probestep: 3.0
minprobe: 0.0
pymol: True
waterpdb: False
pdbfile: /var/www/html/3vee/output/uploads/2023.may25.29a.pdb
maxprobe: 9.0

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Images of your surface at probe size: 0.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 41297 Å3
Surface area: 38524 Å2
Sphericity, Ψ: 0.15
Effective radius: 3.22 Å
Center of Mass: (4.9, -2.5, -9.9) Å

Downloadable files of your surface:


Images of your surface at probe size: 3.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 62819 Å3
Surface area: 15928 Å2
Sphericity, Ψ: 0.48
Effective radius: 11.83 Å
Center of Mass: (3.9, -2.5, -9.9) Å

Downloadable files of your surface:


Images of your surface at probe size: 6.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 72880 Å3
Surface area: 14599 Å2
Sphericity, Ψ: 0.58
Effective radius: 14.98 Å
Center of Mass: (4.9, -2.4, -9.6) Å

Downloadable files of your surface:


Images of your surface at probe size: 9.000:

           
View Volume in Jmol  

Volume Information

Voxel size: 0.5 Å
Volume: 78057 Å3
Surface area: 14304 Å2
Sphericity, Ψ: 0.62
Effective radius: 16.37 Å
Center of Mass: (3.7, -2.4, -9.4) Å

Downloadable files of your surface:

Downloadable files of your surface:

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Citation:
'3V: cavity, channel and cleft volume calculator and extractor' (free text)
Nucleic Acids Res. 2010 July 1; 38(Web Server issue): W555–W562
by Neil R. Voss and Mark Gerstein
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If you find this useful or want more functionality please contact Neil <vossman77 [at] gmail [dot] com>
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